| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_32580 |
|---|
| Symbol | |
|---|
| ID | 4380563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2828951 |
|---|
| End bp | 2829631 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325189 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_790758 |
|---|
| Protein GI | 116050423 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.16072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTAC TGCTCACCGA AGACGACGAC CTGATCGCCA GCGGCATCGT CGCCGGCCTC
AACGCCCAGG GCCTGACCGT GGACCGGGTG GCCAGCGCCG CCGATACCCA GGCGCTGCTC
CAGGTGGCGC GCTTCGACGT GCTGGTCCTC GATCTCGGCC TGCCCGACGA GGACGGCCTG
CGCCTGCTGC AACGCCTGCG CCAGCAGGGC GTCGACCTGC CGGTGCTGGT GCTGACCGCG
CGCGACGCGG TGACCGACCG GGTCGCCGGG TTGCAGGCCG GCGCCGACGA CTACCTGCTC
AAGCCCTTCG ACCTGCGCGA ACTCGGCGCC CGCCTGCATA CCTTGCAGCG GCGCTCCGCC
GGGCGCTGCG TCAACGTCAT CGAACACGGT CGCCTCAGCT ACGATCCGAG CACCCGCGAA
ACCTGGCTCG ACGGTCGCCC CGTGGAGCTG TCGCGACGCG AACAGGCGCT GTTGCAGGCA
TTGCTCAACA ACCGCGGGCG GATCCTCAGC GGCGAGCAGC TCAAGGACAG CGTCTATGGC
TTCGGCGACG AGGTCGAGAG CAACGCCCTC AACGTCCACA TCCATCACCT GCGGCGCAAG
CTCGGCAACG CCATCGTGCA GACCGTGCGC GGCCTCGGCT ACCGCCTCGG GCCGGCGCGC
GGCGACGGAG ACGACGCATG A
|
|---|
| Protein sequence | MHVLLTEDDD LIASGIVAGL NAQGLTVDRV ASAADTQALL QVARFDVLVL DLGLPDEDGL
RLLQRLRQQG VDLPVLVLTA RDAVTDRVAG LQAGADDYLL KPFDLRELGA RLHTLQRRSA
GRCVNVIEHG RLSYDPSTRE TWLDGRPVEL SRREQALLQA LLNNRGRILS GEQLKDSVYG
FGDEVESNAL NVHIHHLRRK LGNAIVQTVR GLGYRLGPAR GDGDDA
|
|---|
| |