Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_32450 |
Symbol | |
ID | 4382676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2821507 |
End bp | 2822322 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639325179 |
Product | AraC family transcriptional regulator |
Protein accession | YP_790748 |
Protein GI | 116050433 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.288191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.469508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG CCAATACGCC CCGCGACTGG GTTCGACGCG CCCCGCAACA CGGTGCGGTG GAACGCATCG AGGCTTACTT CGCCGGCCAC GGCTACGATC CGCATCGCCA CGACACCTAT GCCATCGGCC AGACCCTGGC CGGGGTGCAG AGCTTCCGCT ATCGCCGCAG CCAGCGCCAC AGCCTGCCGG GCGGCTGCCT GGTGCTGCAT CCCGACGAGC TGCACGACGG CGAGGCCGGC AGCCAGGAAG GGTTCCGCTA CCGGATGCTC TACGTCGAGC CGGCGCTGAT CCAACAGGCC CTCGGCGGCC GGCCGCTGCC GTTCGTGCGC GGGGGCTTGT CCGACGACCC GCGCCTGATC GCCGCCAGCC GGACCCTGCT ACAGGCCATG GATACCCCGC TGGAGCCGCT GGAAGAACAG GACGCCCTGT TCGAACTGGC CCACGCCCTC GACGCTGTAG CCGGCAACCG GGCGCGCGGC AGGCGCCACT TCGACTTCGT CGCCGCCGAG CGCGCCCGGC AGTACATCCA CGCGCACCTG GAGCGCCCGC TGAGCCTCGA CGAACTGGCG CAGGTCGCCC AGCGCGAACG CTGGAGCCTG TCGCGCGATT TCCGCGCGCT GTTCGGCACC AGCCCCTACC GCTACCTGAT CCAGCGCCGG CTGGACATCG CCCGCCGGCT GATGCTCGGC GGCCAGACGC TGGCCGAAGC CGCGCTTGCC GCCGGTTTCG CCGACCAGAG CCACATGACC CGCCATTTCG GCCAGAGCTA CGGCCTGCCG CCGGCACGCT GGCTGCGTAT GCTCGGCCGC GCCTAG
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Protein sequence | MSHANTPRDW VRRAPQHGAV ERIEAYFAGH GYDPHRHDTY AIGQTLAGVQ SFRYRRSQRH SLPGGCLVLH PDELHDGEAG SQEGFRYRML YVEPALIQQA LGGRPLPFVR GGLSDDPRLI AASRTLLQAM DTPLEPLEEQ DALFELAHAL DAVAGNRARG RRHFDFVAAE RARQYIHAHL ERPLSLDELA QVAQRERWSL SRDFRALFGT SPYRYLIQRR LDIARRLMLG GQTLAEAALA AGFADQSHMT RHFGQSYGLP PARWLRMLGR A
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