Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_32240 |
Symbol | catA |
ID | 4380572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2801756 |
End bp | 2802688 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639325161 |
Product | catechol 1,2-dioxygenase |
Protein accession | YP_790730 |
Protein GI | 116050451 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA AGATTTCCCA GACTGCCGAC GTCCAGCGCT TCTTCGAAGA GGCCAGCGGC CAGCTCAACG AACGCGGCGA TCCGCGCACC AAGGCCCTGG TGCGGCGCGT CCTCGACGAC ACGGCGAAGC TGATCGAAGA GATGCAGGTC ACGCCCGACG AATTCTGGAA AGCGGTGGAC TACCTGAACC GCCTGGGCAG CCGCCAGGAA GCCGGCCTGC TGGCCGCCGG GCTGGGCCTG GAGCATTACC TGGACCTGCT GCTCGACGCC CAGGACGCCG AGGCCGGCCT CACCGGCGGC ACGCCGCGCA CCATCGAAGG GCCGCTGTAC GTCGCCGGCG CGCCGCTAAG CGACGGCGAG GCACGGATGG ACGACGGCCG CGACCCCGGC ACCGTGATGT TCCTCCAGGG CCGCGTCAGC GGTCCCGACG GCCAGCCGCT GGCCGGAGCC ATCGTCGACG TCTGGCACGC CAATACCCAA GGCACCTATT CCTACTTCGA CAGCAGTCAG TCCGAATACA ACCTGCGCCG GCGCATCCGC ACCGACGCCG ACGGCCGCTA CCGTGCGCGC AGCATCGTGC CCTCCGGCTA CGGTTGCCCG AGCGACGGCC CGACCCAGGA ACTGCTCGAC CGCCTCGGCC GCCACGGCCA GCGGCCGGCG CACATCCACT TCTTCGTCTC GGCGCCCGGC CATCGCCACC TGACCACCCA GATCAACCTG GCGGGCGACC GCTACCTGTG GGACGACTTC GCCTACGCCA CCCGCGATGG GCTGATCGGC GACCTGCGCT TCAACGACGA TCCCGCCGCG GCCCGCGACC GCGGCGTGGA GGGCGGACGC TTCGCCGAAC TGGATTTCGA CTTCCAGCTC CAGGCCAGCC CGGCGCCCGC CGCCGAGCGC CGCAGCCAGC GGCCGCGGGC ATTGCAGGAG TAA
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Protein sequence | MTVKISQTAD VQRFFEEASG QLNERGDPRT KALVRRVLDD TAKLIEEMQV TPDEFWKAVD YLNRLGSRQE AGLLAAGLGL EHYLDLLLDA QDAEAGLTGG TPRTIEGPLY VAGAPLSDGE ARMDDGRDPG TVMFLQGRVS GPDGQPLAGA IVDVWHANTQ GTYSYFDSSQ SEYNLRRRIR TDADGRYRAR SIVPSGYGCP SDGPTQELLD RLGRHGQRPA HIHFFVSAPG HRHLTTQINL AGDRYLWDDF AYATRDGLIG DLRFNDDPAA ARDRGVEGGR FAELDFDFQL QASPAPAAER RSQRPRALQE
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