| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_31810 |
|---|
| Symbol | tpx |
|---|
| ID | 4383029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2767072 |
|---|
| End bp | 2767569 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639325136 |
|---|
| Product | thiol peroxidase |
|---|
| Protein accession | YP_790705 |
|---|
| Protein GI | 116050476 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.230308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG TGACTCTCAA GGGCAACCCG GTCAACGTCG ATGGCCAGCT CCCGCAGAAA
GGCGCCCAGG CTCCGGCCTT CAGCCTGGTC GGCGGCGACC TCGCCGACGT GACCCTGGAA
AACTTCGCCG GCAAGCGCAA GGTGCTGAAC ATCTTCCCCA GCGTCGACAC CCCGACCTGC
GCCACCTCGG TGCGCAAGTT CAACGTCGAG GCCGGCAAGC TGGCCAATAC CGTGGTGCTG
TGCATTTCCG CCGACCTGCC GTTCGCGCAG AAGCGCTTCT GCGGCGCCGA AGGTTTGGAG
AACGTAGTCA ACCTGTCGAC CCTGCGCGGT CGCGAGTTCC TCGAGAACTA TGGCGTGGCC
ATCGCCAGCG GCCCGCTGGC CGGCCTGGCC GCGCGCGCCG TGGTGGTGCT CGACGAGCAG
AACAAGGTGC TGCACAGCGA ACTGGTCGGC GAAATCGCCG ACGAGCCGAA CTACGCGGCG
GCCCTGGCGG CTCTCTGA
|
|---|
| Protein sequence | MAQVTLKGNP VNVDGQLPQK GAQAPAFSLV GGDLADVTLE NFAGKRKVLN IFPSVDTPTC
ATSVRKFNVE AGKLANTVVL CISADLPFAQ KRFCGAEGLE NVVNLSTLRG REFLENYGVA
IASGPLAGLA ARAVVVLDEQ NKVLHSELVG EIADEPNYAA ALAAL
|
|---|
| |