Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31720 |
Symbol | |
ID | 4381444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2758086 |
End bp | 2759846 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325128 |
Product | hypothetical protein |
Protein accession | YP_790697 |
Protein GI | 116050484 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.137406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGACG TACAGGAATT GCGTTTCACC ACCCACGACG GGGTAGAACT CTTCTACCGC CACTGGCCGG CCAGCCGCCC GGCGCCGGAC GGCACGCGCC AGGCGGTGTT GCTGTTCCAC CGCGGCCATG AGCACTCCGG GCGGATCGCC CACCTGGTCG ACGAACTCGA CCTGCCGGAA CACGACTTCT TCGCCTGGGA CGCCCGTGGC CACGGCCTCT CGCCAGGCGC CCGCGGCGAC AGCCCGAGCT TCGCCACCAG CGTGCGCGAC GTACAGACCT TCGTCGACCA TATCCAGGCC GTCCACGGTA TCGCCGAAGA GCGGATGGCG GTGGTGGCGC AGAGCGTCGG CGCGGTGCTG GTTGCCACCT GGGCCCACGA CTACGCGCCG AAGGTGCGCG CACTGGTGCT GGCTTCGCCG GCGTTCCAGG TCAAGCTCTA CGTGCCGTTC GCCCGCAGCG GGCTGAAACT GATGCGCCTG TGGCGCGGCA ATTTCTTCGT CAACAGCTAT GTCAAGGCAC GCTTCCTCAG TCACGACCCG CAGCGGATCG CCTCCTACGA CAGCGACCCG CTGATCGCCA AGGCGATCTC GGTGAACGTC CTGCTCGGCC TCTACGAAGC TGCCGAGCGG GTGGTAGCGG ACGCACAGGC GATCCAGATT CCCACCCAAC TGCTGATTTC CGGGGCCGAC TTCGTCGTCC ATCGTGCGCC GCAGGAGCGC TTCTTCGAGC GTCTCGGCAG CCTGCGCAAG GAAAAGCACA TCCTGCCCGG CTTCTTCCAC GACACCCTTG GCGAGCGCGA TCGTCACCTG GCCGTCGGCC GTGCCCGGCG CTTCCTCCTC GAGGCATTCG CCACGGTCCC CGAACGACCG AGCCTGCTCG ATGCCGACCG CCTGGGTCAT ACCTGCGCCG AGGCCGAGGC GCTGGCCGCG CCGTTGCCGA AGAACTCGCC GCGCGATCTC TACTGGCGCG CCACCCGTGC CGGCCTGCGC CTGGGCAGCC TGTGGTCGGA CGGGGTCAAG CTGGGCTTCG ACACCGGTTT CGATTCCGGG AGCACCCTCG ACTATGTCTA CCGCAACCAG CCCAGCGGCA GCGGCCCGCT GGGTCGCCTG ATCGACCGCA ACTACCTGGA CTCCATCGGC TGGCGCGGCA TCCGCCAGCG CAAGCTGCAC GCCGAGGAGC TGCTGCGCCT GGCCATGCAG CGGTTGCGCG AGGAGCAGCG CGAGGTGCGC ATCGTCGACA TCGCCGCCGG CCACGGCCGC TACATCCTCG AAGCCCTGCA AGGCGTCGAG CCGCTGCCGG AAAGCATCCT TCTGCGCGAC TACAGCGAGA TCAACGTGCG TGACGGCAGC GCCCTGATCG AAAGCAAGGG CCTCGCCGGC ATCGCCCGCT TTGTCAAGGG CGACGCCTTC GATCGCGCCG ACCTGGCGGC GCTGCAACCG AAGCCGAGCC TCGGGGTGGT TTCCGGGCTC TACGAGCTGT TCGCCGACAA CCGCATGGTC GGCGACTCCC TCGCCGGCCT CGGCGAGGCG CTGGAGGAGG GCGCCTACCT GGTCTACACC GGACAGCCCT GGCACCCGCA GCTGGAACTG ATCGCCCGCG CGCTGACCAG CCACCGCCAG GGCCAGGCCT GGGTGATGCG GCGCCGGACC CAGGCGGAAA TGGACCAGCT GGTGGCCGCC GCCGGCTTCC GCAAGATCAC CCAGCGGGTC GACCAGTGGG GCATCTTCAG CGTATCGCTG GCGCAGAAGG TCGCCCGCTG A
|
Protein sequence | MRDVQELRFT THDGVELFYR HWPASRPAPD GTRQAVLLFH RGHEHSGRIA HLVDELDLPE HDFFAWDARG HGLSPGARGD SPSFATSVRD VQTFVDHIQA VHGIAEERMA VVAQSVGAVL VATWAHDYAP KVRALVLASP AFQVKLYVPF ARSGLKLMRL WRGNFFVNSY VKARFLSHDP QRIASYDSDP LIAKAISVNV LLGLYEAAER VVADAQAIQI PTQLLISGAD FVVHRAPQER FFERLGSLRK EKHILPGFFH DTLGERDRHL AVGRARRFLL EAFATVPERP SLLDADRLGH TCAEAEALAA PLPKNSPRDL YWRATRAGLR LGSLWSDGVK LGFDTGFDSG STLDYVYRNQ PSGSGPLGRL IDRNYLDSIG WRGIRQRKLH AEELLRLAMQ RLREEQREVR IVDIAAGHGR YILEALQGVE PLPESILLRD YSEINVRDGS ALIESKGLAG IARFVKGDAF DRADLAALQP KPSLGVVSGL YELFADNRMV GDSLAGLGEA LEEGAYLVYT GQPWHPQLEL IARALTSHRQ GQAWVMRRRT QAEMDQLVAA AGFRKITQRV DQWGIFSVSL AQKVAR
|
| |