Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31460 |
Symbol | |
ID | 4381462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2734428 |
End bp | 2735120 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325110 |
Product | putative transport protein |
Protein accession | YP_790679 |
Protein GI | 116050502 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000370245 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000000416187 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCCGG AAATCGCCAT CGGCCTGGTG ACGGCCCTCG GCCTCGGTGC GCTGGTCGGT CTCGAGCGGC AATGGCGACA ACGCTCTTCC GGCATGGCCA CCCACGCGAT GGTCGCACTC GGTGCGGCCA GCTTCTCGAT CCTGCCGCTG TTGCTCGACA ACGAGGTCAG CGTGACCCGC ATGGCGGCCC AGGTAGTCAG CGGCATCGGT TTTCTCGGCG CCGGCGTGAT CATGCGCGAC GGCCTCAGCG TACGCGGCCT GAGCACTGCG GCGAGCATCT GGAGCACCGG CGCGATCGGC GTACTGGCCG GCAGCGGTTT CATCCTGGCG GCCTGCATGA CGACCGCGCT GATCGTCATC GCCAACCTGT TCCTGCCCGC TCTCGGCCGG GTGGTGGACC GCCACACCTC GGGCGAGGCC GAGCAGGAGC GCTTCTACCA GATCAGCGTG TCCTGCGAGG CGCGCAACGA AGCGCTGGTG CGCATGCAGT TGCTGCAACG CATGGGCGAC AACCGCCTGA ACCTGCAGAG CTTGGAAAGC CACGCGCTGA AAGGCAGCGG CAACGTAGAA GTGAACGCCG TGGTGTTCAC CCTGCACAAG GAGGATTCGC TGGTGGAACA GATGGTCGGC GAGCTGTGCC TGGCACCGCA GGTCACCGCC GCCAGTTGGG TGATGAATCC CGCCGCGGAA TGA
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Protein sequence | MTPEIAIGLV TALGLGALVG LERQWRQRSS GMATHAMVAL GAASFSILPL LLDNEVSVTR MAAQVVSGIG FLGAGVIMRD GLSVRGLSTA ASIWSTGAIG VLAGSGFILA ACMTTALIVI ANLFLPALGR VVDRHTSGEA EQERFYQISV SCEARNEALV RMQLLQRMGD NRLNLQSLES HALKGSGNVE VNAVVFTLHK EDSLVEQMVG ELCLAPQVTA ASWVMNPAAE
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