| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_31040 |
|---|
| Symbol | |
|---|
| ID | 4385856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2698278 |
|---|
| End bp | 2699525 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639325073 |
|---|
| Product | putative cation efflux system protein |
|---|
| Protein accession | YP_790642 |
|---|
| Protein GI | 116050539 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000919684 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 5.14474e-22 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA TCCGCTTAGT GGCCTTGGTG TTCGTCGGGG CCTGCGGCAC ATCCGCAGCC
CTAGCCGCCG AACCCCTGCG GCTGGAGGAG GCAGTCTCCC GCGCGCTCGC TGCCCATCCC
TCCATCACAG CCGAAACGGC GCAGCTCCAG GCTGTTCGTG CCCGCACCCA GCGCGAAGCC
CTGCCACCGC CTTACACGAT TGGCGGTGAG ATGGAAAACG TCGCCGGGAA CGGCAATCTG
CGGGGTATTC GTTCGGCTGA AACGACATTG CGCATCGGCC GAGTTATCGA ACTCGGCGGC
AAGCGCGAGG CTCGTCAAAC ATTAGGGCAA GCCGAACTGA GGGAACAAGA GCATCAGGCC
ACCAAAGCGC GGATCGACTT GGCCAGCACG ACCGCGGCTC GATTCATTGA AGTGCTCGCT
AGGCAACAGC GATTGGCCTA TGCCGAGGAG CGCGTTGAGC AGGCAGAACG CACCCGACAG
GAGGTTGCAG CCTGGGTGAA AGCCGCTCGC AATCCCGATT CTGATTTGCA GGCCGCCAAT
ATTGCAGTCG CAGAGGCGCA GCTTAACCGC GAGAGTGCAG AACACGAATT GGCAAGCGCC
AAGATGACCT TGGCAGCGAG TTGGGGCGCG TTGACGCCGG ACTTCGGTGA AGTCGTCGGC
GACCTGCAAA CCTTGCCGAC CGTAGCGCCA TTCGAGACGT TGGCCGCTCG TTTGCCCATG
ACCCCCGAGC TATGGGCGTC GCGCTTGCGA GCCGACACCA TCGGCGCCCG TCGCCGGCTC
GCGGAGGCCG AGGCCAAACC CAATCTGGAC GTTAGCTTGG GTGTACGTCG TTTTGAGGCC
ACCAGGGATC ACGCCGTGGT GGCGTCAATC TCGATCCCGC TTGGTGGGCC GACACGCTCT
GGATACGCGG TGTCCCAGGC CAACGCCGAA CTGGCTGCGC TGGAGGCACG GCGCGATGCC
GAACGCTTCG AGCGCCACCA GGCACTGTTC GACAAGTATC AGGAACTCAC GCACGCACGT
CACGAACTGG GGTCGTTGCG CGAACGGATG CTGCCTATGG CCGAAAGTGC CTTGGCAACG
ACTCGTCGTG GCTTTGAGCA AGGCCGCTTC TCCTATTTGT CGCTGGCCCA AGCACAGCGA
ACGCTTTTCG ATCTTCGCTC GCGTGCTGTC GAAGCCGCCG CTCGCTATCA CCTTCTGCTG
GTCGAGGTGG AACGCCTCAC CGCCACCGTT GAGGAAAACG CACCATGA
|
|---|
| Protein sequence | MKLIRLVALV FVGACGTSAA LAAEPLRLEE AVSRALAAHP SITAETAQLQ AVRARTQREA
LPPPYTIGGE MENVAGNGNL RGIRSAETTL RIGRVIELGG KREARQTLGQ AELREQEHQA
TKARIDLAST TAARFIEVLA RQQRLAYAEE RVEQAERTRQ EVAAWVKAAR NPDSDLQAAN
IAVAEAQLNR ESAEHELASA KMTLAASWGA LTPDFGEVVG DLQTLPTVAP FETLAARLPM
TPELWASRLR ADTIGARRRL AEAEAKPNLD VSLGVRRFEA TRDHAVVASI SIPLGGPTRS
GYAVSQANAE LAALEARRDA ERFERHQALF DKYQELTHAR HELGSLRERM LPMAESALAT
TRRGFEQGRF SYLSLAQAQR TLFDLRSRAV EAAARYHLLL VEVERLTATV EENAP
|
|---|
| |