| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_31030 |
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| Symbol | |
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| ID | 4385857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2697052 |
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| End bp | 2698281 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639325072 |
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| Product | putative cation efflux system protein |
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| Protein accession | YP_790641 |
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| Protein GI | 116050540 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000427913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 4.33311e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATTCGCA TTCTTTCCCT GCTGCTCCTT TGCGTGTTCG CCGCTGCGTG CAGCCCTGGT
GGCGACAAGC CCAAAGAGGA GGCCAGCGCC CAAGCCAGCG GAAGCTATGA GCGTGGGCCA
AACAATGGCC GACTACTCCG TGATGGAGAC TTCGCCCTCG AAGTCACCAT CTACGAAACC
AATGCGCCCC CGCACTACAG GCTATTTGCC TACCGCGACG GCAAGCCTGT CGCCCCCGCC
GATGTTGTTG CGACCATCAA GCTCTCCCGC CTGGATGGCG AGGTCAACCA ATTCACGTTC
ACGCCGGAGA ACAACTATCT AGTCGGCAGT GGCGAAGTGA CCGAGCCGCA TTCGTTCGAC
GTGGCCGTAT CCGCCGAGCA TGCCGGAAAG AAGTCCACAT GGTCTTACGA GTCCTACGAG
GGGCGCGTCA GCATTCCTGC CAGTATCGCC AAGGATGCCG GCATCAAGAC CGAATCGGCG
GGGCCGGCAG TCATCCGAGA CGTTGTGCGA CTAATGGGAA CTGTTGTTCT GGATGCCGAC
AGGCACGCAG CGGTTCGTGC GCGCTTCCCC GGCATCGTGC GCTCTGTGAA CGTGCAGCAA
GGCGAGCGCG TCCGCCGCGG CCAGACGCTG GCCGTCGTCG AGGGCAATGA CAGTATGCGT
ACCTACCCGA TCACGGCGCC GTTCGATGGC GTCGTGCTCG CGCGCAATAC GAATGTGGGC
GACGTGGCCG AAGCTGGTGC GCTGTTCGAG CTGGCCGACC CGTCCAATGT ATGGATCGAC
CTGCGTGCCA TCGGCACAGA CGCCGAAGTT CTACAGCCAG GCCAAGCCGT GCGAATCCGG
TCAGCGACCG GAAAGACCGA AGCCAGTGGA AAGATTCAAC GGCTGTTGCC GGTGGCCGGC
AGCGGCCAGA GCGTCATTGC CCGCGTCAGC ATCCCGAACC CGGAGGGGCG CTGGCGTCCC
GGTATGACCG TGGCCGCCGA GGTCACAGTA GGCACGCGCA ACGTATCGCT TGCGGTGAAG
GAGTCGGGAT TGCAGCGATT CCGCGACTTC ACCGTGGTAT TCGCACAGGT CGGCGAAACC
TACGAAGTGC GAATGCTTGA GCTTGGGGAG CGGGATGGCG AATACGTTGA AGTGACCGGC
GGACTCAAGC CCGGCACGAA CTACGTGGCC GAGCAAAGTT TCCTGATACG CCAAGACATC
GAAAAGTCTG GCGCCAGCCA CGATCACTGA
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| Protein sequence | MIRILSLLLL CVFAAACSPG GDKPKEEASA QASGSYERGP NNGRLLRDGD FALEVTIYET
NAPPHYRLFA YRDGKPVAPA DVVATIKLSR LDGEVNQFTF TPENNYLVGS GEVTEPHSFD
VAVSAEHAGK KSTWSYESYE GRVSIPASIA KDAGIKTESA GPAVIRDVVR LMGTVVLDAD
RHAAVRARFP GIVRSVNVQQ GERVRRGQTL AVVEGNDSMR TYPITAPFDG VVLARNTNVG
DVAEAGALFE LADPSNVWID LRAIGTDAEV LQPGQAVRIR SATGKTEASG KIQRLLPVAG
SGQSVIARVS IPNPEGRWRP GMTVAAEVTV GTRNVSLAVK ESGLQRFRDF TVVFAQVGET
YEVRMLELGE RDGEYVEVTG GLKPGTNYVA EQSFLIRQDI EKSGASHDH
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