| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_30970 |
|---|
| Symbol | |
|---|
| ID | 4385901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2691005 |
|---|
| End bp | 2692000 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639325067 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_790636 |
|---|
| Protein GI | 116050545 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000030684 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 5.74685e-22 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAG CATTAACCGA GAAGCAAGTG CTATGTCGGC TCGGAGGGAA TGAATATTCT
ATGGAGTTGA GACACCTGAA GTATTTTCTC GCCGTAGCTG AGGAGCTTCG CTTCGCCCGT
GCCGCAGAGA AGCTGCACAT TGAGCAATCG CCCTTGTCCC GAGCCATCAA GGAACTGGAA
GAAGAACTGG GTGTTGTGCT GTTTGCCCGC ACCACCCGCA GCACCAGGCT AACCCGCGCT
GGCAAGTTGT TCTTGGAGCA CGTTCGTCGC GTACTCGCTG CTGTGGAACA GGCTCGCGAG
AGCGTCAAGG CTGCGGCCAA CGGCTTTCAC GGGCAGTTGC GCGTGGCGTT GTCCGATGGC
ATCACGCCAT CGCGTCTATC TGCCTTGCTC GTACTTTGTC GCCAGGAAGA ACCTGAGGTA
GAAATCCGAT TCTTCGAGGT GCCCCTGTCA CAGCAGATCA AAGGGCTTCA TAGCGATCTG
TACGACGTGG GATTCGCCCA GTCCAACGAG GTTGGTGATG GCATCGTCAC CGTACCTGCC
TGGAGCGATA CGCTGATGGT CGCGGTTCCT GGCCGGCATC CGCTGCTGGC CCACAAACGC
ATCCCCTTGG ATGAGCTGCT GCGCTACCCA TTGGTCTTGT GCGATCCGCA AGTGTGCGAA
GGCCACGCCA AGCATGTCGA ACGAGTGCTT CGCCATACTG AGATGGAGCC TTTGATTGCA
GAACGTGTTG CTTCTTGCGA CCTGATGATG GCGCTGGTAT CGGCTGGTTT CGCGCTCGGG
CTGGCCGGCG CCGCACACAT TGCCGCCAGC CGTGAGCCAG GTGTCGTGGC CCGTCCGCTG
GCGCAGCGCG TGCCACCGTT GACGACGTAC TTGCTTCATC TTGACGGTGA TCTATCCGAC
GAACTGGCAA GATTCATTGA GCGCGTACAG ACCATCGAAT CTCTGGAACC CCCAAGGCCG
ATACGAGGTC GAAATCCCGA TGCTTCGGAG GAATGA
|
|---|
| Protein sequence | MALALTEKQV LCRLGGNEYS MELRHLKYFL AVAEELRFAR AAEKLHIEQS PLSRAIKELE
EELGVVLFAR TTRSTRLTRA GKLFLEHVRR VLAAVEQARE SVKAAANGFH GQLRVALSDG
ITPSRLSALL VLCRQEEPEV EIRFFEVPLS QQIKGLHSDL YDVGFAQSNE VGDGIVTVPA
WSDTLMVAVP GRHPLLAHKR IPLDELLRYP LVLCDPQVCE GHAKHVERVL RHTEMEPLIA
ERVASCDLMM ALVSAGFALG LAGAAHIAAS REPGVVARPL AQRVPPLTTY LLHLDGDLSD
ELARFIERVQ TIESLEPPRP IRGRNPDASE E
|
|---|
| |