| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_30940 |
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| Symbol | |
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| ID | 4385904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2686957 |
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| End bp | 2688027 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325064 |
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| Product | putative conjugal transfer protein |
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| Protein accession | YP_790633 |
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| Protein GI | 116050548 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000128533 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 3.72388e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCGCCG TTTCGCAGTT GCCACCCGAG CCACGCTCGT CCGCTGCGGC CTCGCTCGAC
CGGCGCATCC AGATGCTGCG CACGGCGATG GGGCCGCTGA TCGCCACTGC GCTCGAAGAC
CCCGACGTGG TGGAAATCAT GCTCAACCCG GATCGTACCC TTTGGGTGGA TCGGCTTTCG
AGTGGGCGCG CGCCGATGGG CGTGGAGATG CCCGAGGCCG ATGGCGAGCG AATCATCCGC
CTGGTCGCGG CCCACGTCGG CGCGGAGGTG CATCGCGGCC AGCCGCTGCT ATCGGCCGAG
CTGCCCGAGA CGGGCGAACG CTTCGAGGGC ATCTTGCCGC CCGCCGCGCC AGGGCCGGCC
TTCGCGCTGC GCAAGCGCGC CATCGGCGTG ATCCCGCTGG AGCGGTATGT CGTGGACGGA
ATGATGACCG CCGCCCAGGC GGGCTTTCTG GTGCGCGCCG TGCGCGAGCG TCAGAACGTC
CTGATCGCCG GGGCCACCAG CAGCGGCAAG ACCACGCTCG CCAATGCCTT GCTCGCCGAA
ATCGCCGCCA CGGGCGACCG CGTGTTGGTG CTCGAAGACA CGGTGGAGCT GCAATGCGCG
GCCCGCGACC ACGTTCCGCT GCGCACGCGC GCGGGCGTGG TGTCGATGAC CGAGCTGGTG
CGCTCGTCCA TGCGGCTGCG GCCGGATCGC GTGGTGGTTG GCGAGGTGCG CGGCGCCGAG
GCGCTGGATC TCATCAAGGT GTGGGGAACG GGCCACCCCG GCGGGATCGC CACGATCCAT
GCCGGCTCCG CGTTGGGCGC GCTGCTGCGC ATGGAGCAAC TGATTCTCGA AGTGGCGGTG
AACCCGCCGC GTGCGCTGAT CGCCGAGGCG GTCAACGTGG TGATCCACAT CGCCGGACGC
GGGCGCAAGC GCCGCATCGA GAGCATCGCC CGCGTCGTCG GCTCCGACGG CGTGGGCTAC
CAACTGGCGG ACGCGCTGGA GACGCCGTTT CCCGAACTGC CGCTATTTCC CGAAGCCGCA
CCCGCTGCGG CGACTTCCCC GTCCCCTGAC CAACCTGGAG AACTGCCATG A
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| Protein sequence | MSAVSQLPPE PRSSAAASLD RRIQMLRTAM GPLIATALED PDVVEIMLNP DRTLWVDRLS
SGRAPMGVEM PEADGERIIR LVAAHVGAEV HRGQPLLSAE LPETGERFEG ILPPAAPGPA
FALRKRAIGV IPLERYVVDG MMTAAQAGFL VRAVRERQNV LIAGATSSGK TTLANALLAE
IAATGDRVLV LEDTVELQCA ARDHVPLRTR AGVVSMTELV RSSMRLRPDR VVVGEVRGAE
ALDLIKVWGT GHPGGIATIH AGSALGALLR MEQLILEVAV NPPRALIAEA VNVVIHIAGR
GRKRRIESIA RVVGSDGVGY QLADALETPF PELPLFPEAA PAAATSPSPD QPGELP
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