| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_30870 |
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| Symbol | |
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| ID | 4385910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2680695 |
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| End bp | 2681399 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639325058 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_790627 |
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| Protein GI | 116050554 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000177985 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 2.25295e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGATTCA AGAAACCGCA GGTGCGCTAC GCCGACACGC CGCAGCCTGC CACGCCGTAC
CAAGCTGCCG GCCAGGTGTG GGACGACCGT ATCGGCTCGC CGCGCGTGCA GGCGAAGAAC
TGGCGCTTGA TGGCGTTCGG GTGCCTGACG CTCGCGCTGC TGATGGCCGG CGGCCTGGTG
TGGCGCTCGG CGCAGTCCAT CGTGACGCCC TATGTGGTGG AGGTGGACAA CGCGGGCCAG
GTGCGCGCTG TGGGCGAAGC CGCCACGCCG TACCGCCCCA GCGATGCACA GACGGCGCAC
CACATTGCGC GCTTCGTGAC GCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTCGTCCGC
CAAAACTGGC TGGACGCCTA CGACTACACG ACCGACAAGG GCGCGGCCGT GCTCAACGAC
TACGCGCGGG TCAACGACCC GTTCGCACGC ATCGGCAAGG AGTCGGTGAC GGTGCAGATC
ACCAGCGTCG TGCGCGCCAG CGACACGTCT TTCAACGTGC GCTGGACGGA ACGGCGCTAC
GTCAACGGCG CCGCGGCGGG CCTGGAGCGG TGGACGGCGG TGGTGTCCAT CGTGCTCCAG
CCACCGCGCA CCGAAGAACG CCTGCGCAAG AACCCGCTGG GCATCTACGT CAACGGCCTG
TCGTGGAGCC GTGAACTGGA TTCTTCCGAA GGAGCAAAGC CATGA
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| Protein sequence | MRFKKPQVRY ADTPQPATPY QAAGQVWDDR IGSPRVQAKN WRLMAFGCLT LALLMAGGLV
WRSAQSIVTP YVVEVDNAGQ VRAVGEAATP YRPSDAQTAH HIARFVTLVR SLSIDPIVVR
QNWLDAYDYT TDKGAAVLND YARVNDPFAR IGKESVTVQI TSVVRASDTS FNVRWTERRY
VNGAAAGLER WTAVVSIVLQ PPRTEERLRK NPLGIYVNGL SWSRELDSSE GAKP
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