Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30800 |
Symbol | |
ID | 4380605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2670885 |
End bp | 2671487 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639325051 |
Product | hypothetical protein |
Protein accession | YP_790620 |
Protein GI | 116050561 |
COG category | [R] General function prediction only |
COG ID | [COG3560] Predicted oxidoreductase related to nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0987437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000000000186465 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGACG CATTCCTCTC CTCCATCAAG AACCGCCGCA CCATCTACGC CCTGGACAAG CAACTGCCTA TCTCCCAGGA GAAAGTCGTC GAACTGGTCA AGGAGGCCGT CTCGCACAGC CCTTCCGCGT TCAACTCGCA GACCTCGCGG GTGGTCGTGC TGTTCGGCGC CGAGCACGAG CAGTTCTGGA ACATCGCCAA GGACGAGTTG AAGAAGATCG TTCCCGCCGA CGCCTTCGCC GCCACCGAAA CCAAGCTCAA CTCCTTCGCT GCCGGTGCCG GCACCGTACT GTTCTTCGAA GACCAGACGG TAGTGCGCCA GCTTCAGGAG CAGTTCGCCC TCTACGCCGA CAACTTCCCG GTGTGGTCGG AGCAGGCCAG CGGCATGGCC CAGTTCGCGG TCTGGACCGT CCTCGCCGAG CACAAGGTCG GCGCCAGCCT GCAGCACTAC AACCCGCTGG TAGATGCCCA GACCCACAAG ACCTGGAACC TGCCGGAAAG CTGGAAGCTG CGCGCACAGA TGCCTTTCGG TGCCATCGCC GCCCCGGCGG GCGAGAAAGC CTTCATCGCC GAAAGCGAAC GTTTCAAGGT CTTCGGCAAC TGA
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Protein sequence | MSDAFLSSIK NRRTIYALDK QLPISQEKVV ELVKEAVSHS PSAFNSQTSR VVVLFGAEHE QFWNIAKDEL KKIVPADAFA ATETKLNSFA AGAGTVLFFE DQTVVRQLQE QFALYADNFP VWSEQASGMA QFAVWTVLAE HKVGASLQHY NPLVDAQTHK TWNLPESWKL RAQMPFGAIA APAGEKAFIA ESERFKVFGN
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