Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30470 |
Symbol | |
ID | 4385922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2639073 |
End bp | 2640017 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325024 |
Product | putative periplasmic aliphatic sulfonate-binding protein |
Protein accession | YP_790595 |
Protein GI | 116050586 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA AGCAATACCT GCTAACCAGC TTCGCCACGC TTCTGCTCGG TGCCTCCCTG GCCCAGGCCG CAGACCTGCC GACGTTGCGT GTGGGCGACC AGAACTACTA CAACGTGCGG GCTTCCATGG AGGCCTCGGG AGTTCTCGAA GGCGCGCCTT ACCAGGTCGA ATGGAAGCAT TTCCAGTCCG CCGCGCCGGT GGCCGAAGGG TTGCAGGCCG GAGCGCTGGA CCTGGGTTTC CTCGGCGACT CGGGCTTCAT CTTCCTCGCC GCCAAGGGTG CGCCGGTGAA GCTGGTCGGC GTCTCGCGGC AGAACCTCGA TACCATAGCC CTGCTGGTGC CGAAGGATTC TCCGGTGCGC AGCATTGCCG ATCTCAAGGG CAGGAAAGTC GCCTACTGGC CCGGTGCCTG GAGCCAGCAA CTGACCTTGC GCGCGCTGGA GAAAGCCGGC TTGCCGAAGG ACTACGTGGA GTTCGTCAAG CTGATGCCGA TCGACGCCGC CGCCGCCTTG CCGCGCGGCA GCATCGATGC CTTTCCGGTG TGGGAGCCGT ATATCTCGCA GCAGATCGTG GTTTCCGGCG CACGGCCGAT TCTCACCGCC CGCGACCTGA TGCCGGGGCT GTCCAGCATC GCCGCCAACG CTGCTTCCAT CGAGCCCAGG CGCGCGCAGA TCGCCGACTT CCTCGGCCGC CTGCGCAAGG CACGGGCCTG GGTCGAAGCA CACAAGGAGC AGTACGCCGA CCTCTGGGCG CAGAAGGCCA ATCTCGACCG GGCAGTCTCC CGCCATTGGA TCGGCCAGGC CGGCATGAGC GTCGGCCCGG TAGACGCCCA GGCCGCCACC GACTACCAGG AGACCGCGGA TTTCCTGCTG CAGACCGGTG CCTTGCCCAA GCCGTTCGAC ACTTCCACGG TGATCGACAC GTCCTTCAAC GAAGCCTTCC ACTGA
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Protein sequence | MKLKQYLLTS FATLLLGASL AQAADLPTLR VGDQNYYNVR ASMEASGVLE GAPYQVEWKH FQSAAPVAEG LQAGALDLGF LGDSGFIFLA AKGAPVKLVG VSRQNLDTIA LLVPKDSPVR SIADLKGRKV AYWPGAWSQQ LTLRALEKAG LPKDYVEFVK LMPIDAAAAL PRGSIDAFPV WEPYISQQIV VSGARPILTA RDLMPGLSSI AANAASIEPR RAQIADFLGR LRKARAWVEA HKEQYADLWA QKANLDRAVS RHWIGQAGMS VGPVDAQAAT DYQETADFLL QTGALPKPFD TSTVIDTSFN EAFH
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