Gene PA14_30470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30470 
Symbol 
ID4385922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2639073 
End bp2640017 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID639325024 
Productputative periplasmic aliphatic sulfonate-binding protein 
Protein accessionYP_790595 
Protein GI116050586 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA AGCAATACCT GCTAACCAGC TTCGCCACGC TTCTGCTCGG TGCCTCCCTG 
GCCCAGGCCG CAGACCTGCC GACGTTGCGT GTGGGCGACC AGAACTACTA CAACGTGCGG
GCTTCCATGG AGGCCTCGGG AGTTCTCGAA GGCGCGCCTT ACCAGGTCGA ATGGAAGCAT
TTCCAGTCCG CCGCGCCGGT GGCCGAAGGG TTGCAGGCCG GAGCGCTGGA CCTGGGTTTC
CTCGGCGACT CGGGCTTCAT CTTCCTCGCC GCCAAGGGTG CGCCGGTGAA GCTGGTCGGC
GTCTCGCGGC AGAACCTCGA TACCATAGCC CTGCTGGTGC CGAAGGATTC TCCGGTGCGC
AGCATTGCCG ATCTCAAGGG CAGGAAAGTC GCCTACTGGC CCGGTGCCTG GAGCCAGCAA
CTGACCTTGC GCGCGCTGGA GAAAGCCGGC TTGCCGAAGG ACTACGTGGA GTTCGTCAAG
CTGATGCCGA TCGACGCCGC CGCCGCCTTG CCGCGCGGCA GCATCGATGC CTTTCCGGTG
TGGGAGCCGT ATATCTCGCA GCAGATCGTG GTTTCCGGCG CACGGCCGAT TCTCACCGCC
CGCGACCTGA TGCCGGGGCT GTCCAGCATC GCCGCCAACG CTGCTTCCAT CGAGCCCAGG
CGCGCGCAGA TCGCCGACTT CCTCGGCCGC CTGCGCAAGG CACGGGCCTG GGTCGAAGCA
CACAAGGAGC AGTACGCCGA CCTCTGGGCG CAGAAGGCCA ATCTCGACCG GGCAGTCTCC
CGCCATTGGA TCGGCCAGGC CGGCATGAGC GTCGGCCCGG TAGACGCCCA GGCCGCCACC
GACTACCAGG AGACCGCGGA TTTCCTGCTG CAGACCGGTG CCTTGCCCAA GCCGTTCGAC
ACTTCCACGG TGATCGACAC GTCCTTCAAC GAAGCCTTCC ACTGA
 
Protein sequence
MKLKQYLLTS FATLLLGASL AQAADLPTLR VGDQNYYNVR ASMEASGVLE GAPYQVEWKH 
FQSAAPVAEG LQAGALDLGF LGDSGFIFLA AKGAPVKLVG VSRQNLDTIA LLVPKDSPVR
SIADLKGRKV AYWPGAWSQQ LTLRALEKAG LPKDYVEFVK LMPIDAAAAL PRGSIDAFPV
WEPYISQQIV VSGARPILTA RDLMPGLSSI AANAASIEPR RAQIADFLGR LRKARAWVEA
HKEQYADLWA QKANLDRAVS RHWIGQAGMS VGPVDAQAAT DYQETADFLL QTGALPKPFD
TSTVIDTSFN EAFH