Gene PA14_29820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_29820 
Symbol 
ID4380682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2581991 
End bp2583049 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID639324971 
Producthypothetical protein 
Protein accessionYP_790543 
Protein GI116050638 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0125581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA CGAAACTGGA ATCCCGGACT TTTCTCCTGT TGCTGGCGGT GGTCACGCTC 
GCCTTCGGCT GGCTCTTGCT GCCGTTCTAC GGCGCGGTGT TCTGGGGCAC CATCCTGGCG
ATCATCTTCG CCCCGGTGCA ACGCCGCCTG CAGGTGCGTC TGAGGGATCG GAAGAACCTC
GCCGCGCTGA TCACCCTGCT GATCTGCGTG CTGATCGTGA TCATCCCGGT GATCTTCATC
GCCGGTTCGC TGGTGCAGGA AGGCGCGAGC GTCTACCAGC GGGTCAAGTC CGGCGAACTG
AACTTCGCCG CCTACCTGCA GCAGGCGGTG GCCGCCTTGC CGCCATCGGT GCACCAGTGG
CTGGAGCGCT TCGACCTGGC CAATCTCTCG AGCCTGCAGG AGAAGCTCTC CTCGGTGGCG
ATGCAGGCCA GCCAGGTGGT GGCGACCAAG GCGTTCAGCA TCGGCCAGAA CACCCTCGAC
TTCGTCATCA GCTTCGGCAT CATGCTCTAC CTGCTGTTCT TCCTCCTTCG CGACGGTCGC
GTGCTCGGCC GGCGGATCAA GCAGGCGGTG CCGCTGAGCC AGGAACACAA GCACCACCTG
TTCGCCAAGT TCACCACGGT GATCCGCGCC ACGGTGAAGG GCAACATCGC CGTGGCTGCC
ACCCAGGGCG CTCTCGGCGG CCTGATCTTC TGGGTGCTGG GCATCGAGGG CGCCTTGCTC
TGGGGCACCC TGATGGCCTT CCTGTCGCTG CTGCCGGCCA TCGGCGCGGC GCTGATCTGG
GCGCCGGTGG CGGCCTATTT CCTGCTCACC GGGGCGATCT GGCAGGGCGT AGTGCTGATC
CTGTTCTGCG TGGTGGTGAT CGGCCTGGTG GACAACATCC TGCGCCCGAT CCTGGTCGGC
AAGGACACCA AGATGCCGGA CTACGTGGTG CTGATCTCCA CCCTCGGCGG TATGGCCTTG
TTCGGCCTCA ACGGCTTCGT CATCGGCCCG CTGATCGCCG CGCTGTTCAT GGCCAGTTGG
GACCTGTTCA CTGGTCGCGA GGAAGAACCA CAGGCCTGA
 
Protein sequence
MLDTKLESRT FLLLLAVVTL AFGWLLLPFY GAVFWGTILA IIFAPVQRRL QVRLRDRKNL 
AALITLLICV LIVIIPVIFI AGSLVQEGAS VYQRVKSGEL NFAAYLQQAV AALPPSVHQW
LERFDLANLS SLQEKLSSVA MQASQVVATK AFSIGQNTLD FVISFGIMLY LLFFLLRDGR
VLGRRIKQAV PLSQEHKHHL FAKFTTVIRA TVKGNIAVAA TQGALGGLIF WVLGIEGALL
WGTLMAFLSL LPAIGAALIW APVAAYFLLT GAIWQGVVLI LFCVVVIGLV DNILRPILVG
KDTKMPDYVV LISTLGGMAL FGLNGFVIGP LIAALFMASW DLFTGREEEP QA