Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_29490 |
Symbol | |
ID | 4380707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2557190 |
End bp | 2558917 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324945 |
Product | putative type II secretion protein |
Protein accession | YP_790517 |
Protein GI | 116050663 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTG AGGCCGTTTC CCCGGGCCCG CAGGTGACGG CCGAGTGGAT ACCGCTGGGG CAGCGTTTGC TCGAACGCGG GTTGGTGAGC GGCCAGGAAC TCGAGCGGGC GCTCGACCTG CAACGCCGGC TTGGCGGCCG CCTGGGAGGT ATTCTCGTGC GTTCCGGAGC CATCTCGGAA AATACCCTCA TGCAGGTGCT GGCGGAGCAA CTGCGGTTGC CGCTGGTGGG GGACGACCTG CGGAAGCCGA GCGAAGAGTC CATCGCCGCA TTCCTGCTCA GCACCCCGAT CAATACCGAC TGGTTCGTCG AAGAGCAACT GGTGGTCTGG GAGGAGGGCG AGCAACTGCT GTTCGCGGCG CGTGATCCGT TATCTCCTTC GATACGCGAA ACCCTGGGCT ATTTCTATCC GGAGCGCTCG ATTCAAGCAG TGCTGTGCCG CTCCCAGGAT CTGGACGGCT GGTTGGAGCA TTCCCTGGAC CTGGCCCGGC AAGGTGCGGA TCGGCACGCC TACGGCAGCG AAGACATCCG CTACCTGCGG GAGCTGGCGG AGGAGGCGCC GGTAGTCGAA CTCGTCAACA ACGTGATGAG CCAGGCCATG GAAAAGCGCT CTTCGGATAT TCACATCGAA CCCCGGGAGT TCGACTTCCG TATCCGCTTC CGCGTCGACG GCGTCCTGCA CGACCAACTG AGCCTTCCCC GCGAGCGATT CGCGGCGGTT GTCTCGCGGA TCAAGCTGAT CTCCGCCATC GACATCGCGG AGCGACGGTT GCCGCAGGAT GGACGCATGA GCATCCGGGT CAGCGGTACG GAGCTCGACG TGCGGGTCTC CACCTTGCCA GGGGTGCATG GCGAATCGGT GGTCATGCGC CTGTTGCCGA AGGAGCGCGA GGGGTTGCGC CTGGACCGGC TCGGGATGCT CCCGGACCAC TTGCGGAGGA TGCGTGCATG GGTAGCGGAA CCCCACGGCA TCATCCTGGT GACCGGCCCC ACCGGATCGG GCAAGTCCAC CACGCTCTAT GGCGCGCTGG AGGAAATCAA TGATGGCGTG CGCAAGCTCA TCAGCGTGGA AGATCCCGTG GAGTACCAGG TGCCCAACAT CACCCAGGTC CAGGTCCATG CCGACATCGG CCTGACCTTC GCTGCCGCCT TGCGCTCGAT CCTGCGGCAG GATCCCGATG TGATCATGAT CGGGGAGATA CGCGACCTGG AGACGGCGGA GATCGCCGTA CAGTCCTCGC TCACCGGTCA CCTGGTGCTT TCGACCCTGC ATACCAACGA TGCGGTGAGT GCCTTCACGC GCTTGATCGA CATGGGCGTG GAACCCTTCC TGGTGGCTTC GCCGGTGCGC GGTGTCCAGG CCCAGCGACT GGTGCGCAGG TTGTGCGCCC ACTGCGCGGA ACCTTGCGAG CCAACCCTTG CTGCGGCCGA TCTGGCAGCG ACCGAGGCGG CCACCGCGCG GCTGTTCCCG GGGCAGGCAG CGCAATGGCG CGTGGCGCGA GGCTGCGGCC GCTGCGAAGG TACCGGCTAC AGCGGCCGTG TGGGCATCTA CGAACTCGTC GATCTGTCTT CCGAGATGCG CGACCTGATC GTGCAGAGAG CTTCCCTCGA ACAGATGCAT CGGCTTGCCG CCAGCCAGGG ACAGCGCAAT CTGCGTGAAG ATGGCTTGAT CAAGGCCTGG TTGGGTATGA CCAGTCTTGA CGAGGTGCAT CGCGTGACCA GCGGCTAA
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Protein sequence | MSSEAVSPGP QVTAEWIPLG QRLLERGLVS GQELERALDL QRRLGGRLGG ILVRSGAISE NTLMQVLAEQ LRLPLVGDDL RKPSEESIAA FLLSTPINTD WFVEEQLVVW EEGEQLLFAA RDPLSPSIRE TLGYFYPERS IQAVLCRSQD LDGWLEHSLD LARQGADRHA YGSEDIRYLR ELAEEAPVVE LVNNVMSQAM EKRSSDIHIE PREFDFRIRF RVDGVLHDQL SLPRERFAAV VSRIKLISAI DIAERRLPQD GRMSIRVSGT ELDVRVSTLP GVHGESVVMR LLPKEREGLR LDRLGMLPDH LRRMRAWVAE PHGIILVTGP TGSGKSTTLY GALEEINDGV RKLISVEDPV EYQVPNITQV QVHADIGLTF AAALRSILRQ DPDVIMIGEI RDLETAEIAV QSSLTGHLVL STLHTNDAVS AFTRLIDMGV EPFLVASPVR GVQAQRLVRR LCAHCAEPCE PTLAAADLAA TEAATARLFP GQAAQWRVAR GCGRCEGTGY SGRVGIYELV DLSSEMRDLI VQRASLEQMH RLAASQGQRN LREDGLIKAW LGMTSLDEVH RVTSG
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