| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_29480 |
|---|
| Symbol | |
|---|
| ID | 4380708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2556397 |
|---|
| End bp | 2557200 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639324944 |
|---|
| Product | putative permease of ABC-2 transporter |
|---|
| Protein accession | YP_790516 |
|---|
| Protein GI | 116050664 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGGTT CCCTCTTGGT ACCGGCCAGT CTCGCCAGTC GCATCAGGCT CCTGCTGGTC
ATGACCCGGC GCGAGGTCGA ACTGCGTTAT CGCGACGCCA TGTTGGGCCG CATCTGGATC
ATCGTCTCGC CGTTCCTGCT CTTGCTGATC TATACGTTTG TCTTCGGCTT TGTGCTGAAG
TCGCGCTGGG GTGGAAGCCA GAGCACGCTT TCCTTCGCCT TGACCCTGTT TTCCGGACTC
CTGCTGAACG GGATCCTCGC TGAAAGCCTG TCCAGGGCCC CGACTATCAT CCAGGCCAAC
GCCAACTACG TGAAGAAGCT GGTTTTTCCC CTGGAGATAC TCCCCCTCAC ACCGCTGCTG
GCCGCATTCT TCAACGCCAT GCTCGGCTAC CTGGTGCTCT GTATCTTTCT TCTCTTCAGC
GGCGTCGAGC CGGGCTGGCA ACTGGTTCTG CTACCGCTTG CCCTGCTCCC CTTCCTGCTC
TGCGTGACGG GGCTGGCGTG GTTCCTCGCG GGGCTCGGGG TCTATGTTCG CGACATAGGG
CAGTTCGTCC AGTTTCTCCT GGTGCTTCTG CTATTCATCA GCCCGGTGTT CTATCCGCTG
TCATCCTTGC CACCGGTAAT GCAGCCCTAC CTGTACCTCA ATCCGCTGAC GATCCCGGTG
GAAATGGTCA GGGCGATCCT TTTCGATGCT CCCTATCCGA CCCTTGAGGT CTTCAGCGTT
TATTGCGTTG CGTCGCTGCT GGTCTGTTCA TCGGGCTTCC TCTGGTTCCG TCGGGTACAG
GAAGGTTTTG CAGATGTCCT CTGA
|
|---|
| Protein sequence | MSGSLLVPAS LASRIRLLLV MTRREVELRY RDAMLGRIWI IVSPFLLLLI YTFVFGFVLK
SRWGGSQSTL SFALTLFSGL LLNGILAESL SRAPTIIQAN ANYVKKLVFP LEILPLTPLL
AAFFNAMLGY LVLCIFLLFS GVEPGWQLVL LPLALLPFLL CVTGLAWFLA GLGVYVRDIG
QFVQFLLVLL LFISPVFYPL SSLPPVMQPY LYLNPLTIPV EMVRAILFDA PYPTLEVFSV
YCVASLLVCS SGFLWFRRVQ EGFADVL
|
|---|
| |