Gene PA14_29300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_29300 
Symbol 
ID4380721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2535012 
End bp2535536 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID639324931 
Productputative transcriptional regulator 
Protein accessionYP_790503 
Protein GI116050677 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.976463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCT ATAGCGCCGG CGTCGAATAC GGCATCCACT GCCTGTTGTT CCTCGCCGAC 
GAGAAAGGCG ACAGCCGCGA GTCCAGCGTG CGCACCCTCG CCGAGTTGCA GGGCGTGCCG
CCGGAACTGC TGGCCAAGGT CTTCACCCGC CTGGCCAAGG CCGGCCTGGT GGCTGCCACC
GAAGGCGTGC GCGGCGGCTT CCGCCTGGCG CGGCCGGCCA ACGAAATCAG CGTGCTCGAC
GTGGTCCGCG CCATCGACGG CGACAAATCG ATCTTCGAAT GCCGCGAGGT CCGCGAGCGC
TGCGCGATCT TCGAAGGCAA CCCGCCTTCC TGGGCGACCC GCAACACCTG CTCGATCCAC
GCGGTGATGC TCACCGCGCA GAAGCGCATG GAAGAAGCGC TGGCCCAGCA GACCATCCTC
GACCTGGTAC GCCGGGTGGG GCGTATCGCG CCGCCGGAGT TCGGCGAAGA AGTGCTGCGC
TGGATGGATG CCAGCCGGGA AGGACGCGGC GGCTCCCGCG ACTAG
 
Protein sequence
MALYSAGVEY GIHCLLFLAD EKGDSRESSV RTLAELQGVP PELLAKVFTR LAKAGLVAAT 
EGVRGGFRLA RPANEISVLD VVRAIDGDKS IFECREVRER CAIFEGNPPS WATRNTCSIH
AVMLTAQKRM EEALAQQTIL DLVRRVGRIA PPEFGEEVLR WMDASREGRG GSRD