| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_29230 |
|---|
| Symbol | |
|---|
| ID | 4384670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2528163 |
|---|
| End bp | 2530001 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324924 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790496 |
|---|
| Protein GI | 116050684 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG ACCTGATCCT GCACAACGGC CGCTTCCACA CCGTGGACCG CGACAACCCC
ACCGCCACCG CCGTGGCGAT CAAGGACGGC AAGTTCCTTG CCGTCGGCAA CGACGCCGAG
GCGATGCTCC ATCGCGGCAG CGCCACCCAG GTGATCGACC TGCAGAAGCG CACCGTGATC
CCCGGTCTCA ACGACTCGCA CCTGCACCTG ATCCGCGGTG GCCTCAACTA CAACCTGGAG
CTGCGCTGGG AAGGCGTGCC CTCCCTGGCC GACGCCTTGC GCATGCTCAA GAACCAGGCC
GAACGCACGC CCAGCCCCCA GTGGGTGCGG GTGGTCGGCG GCTGGAACGA GTTCCAGTTC
GCCGAGAAGC GCATGCCGAC CCTGGAGGAA TTGAACAAGG CCGCGCCGGA CACCCCGGTG
TTCGTCCTCC ACCTGTACGA TCGCGCCCTG CTCAACCGCG CCGCCCTGCG CGTGGTCGGC
TACACCAAGG ACACGCCCAA CCCGCCCGGC GGCGAGATCG TCCGCGACAG CAGCGGCGAA
CCCACCGGCA TGCTGATCGC CCGGCCCAAC GCGATGATTC TCTACGCCAC CCTGGCCAAG
GGACCGAAGC TGCCGCTGGA GTACCAGGTC AACTCCACCC GCCAGTTCAT GCGCGAACTC
AACCGCCTCG GCCTGACTAG CGCGATCGAC GCCGGCGGCG GCTTCCAGAA CTACCCGGAC
GACTACCAGG TGATTCGCGA ACTGGCCGAC CAGGGCCAGC TCACCGTACG CATCGCCTAC
AACCTGTTCA CCCAGAAACC GAAGGAAGAA CTCGCCGACT TCAAGAACTG GACCGGCAGC
GTCAAGTACG GCCAGGGCAG CGATTTCTTC CGCCACAACG GCGCCGGCGA GATGCTAGTG
TTCTCCGCCG CCGACTTCGA GGACTTCCTC GAACCGCGCC CGGACCTGCC GCAGACCATG
GAGCAGGAGC TGGAGCCGGT GGTCCGCCAC CTGGTGGAGC AGCGCTGGCC GTTCCGCCTG
CACGCCACCT ACGACGAATC GATCTCGCGG ATGCTCGACG TGTTCGAGAA GGTCGACCGC
GACATTCCGT TCAACGGCCT GCCCTGGTTC TTCGACCACG CCGAGACCAT CACCCCGCGC
AACATCGAGC GGGTGCGGGC ACTCGGCGGC GGCATCGCGA TCCAGGACCG CATGGCCTTC
CAGGGCGAGT ACTTCGTCGA CCGCTACGGT GCCAAGGCCG CCGAGGCCAC GCCGCCGATC
CAGCGCATGC TCGCCGAGGG CGTGCCGGTG GGTGCCGGCA CCGACGCCAC CCGGGTCTCC
AGCTACAACC CCTGGACCTC GCTGTACTGG CTGGTCAGCG GCCGCACCGT CGGCGGCATG
GCCCTGTATC CGCAGGGCCT GCCGCGGGAA ACCGCGTTGC AGCTGTTCAC CCACGGCAGC
GCCTGGTTCT CCAGCGAGCA GGGCAAGAAA GGACAGATCA AGGTTGGACA GCTCGCCGAC
CTGGCGGCGC TGTCGGCGGA CTTCTTCAGC GTCGAGGAAG AGGCCATCAA GTGGATCGAG
TCGGTGCTCA CGGTGGTCGA CGGCAAGATC GTCTATGCCG CCGCCGAGTT CGACAAGCTC
GGTCCGCCGG CGCCGCCGGT GCTGCCGGAC TGGTCGCCGG TGGCCAAGGT ACCCGGCCAC
TGGCGGCAAG GCGCGCCGCT GACCGCCCAG GTCCACCAGT GCGTCGGTGC CTGCGCGGTA
CACGCCCACG AGCACAACCG CGCGCGCCAC TCCAACGTAC CGGTGAGCGA CTTCCAGGGT
TTCTGGGGCG CATTCGGCTG TTCCTGCTTC GCTTTCTGA
|
|---|
| Protein sequence | MTADLILHNG RFHTVDRDNP TATAVAIKDG KFLAVGNDAE AMLHRGSATQ VIDLQKRTVI
PGLNDSHLHL IRGGLNYNLE LRWEGVPSLA DALRMLKNQA ERTPSPQWVR VVGGWNEFQF
AEKRMPTLEE LNKAAPDTPV FVLHLYDRAL LNRAALRVVG YTKDTPNPPG GEIVRDSSGE
PTGMLIARPN AMILYATLAK GPKLPLEYQV NSTRQFMREL NRLGLTSAID AGGGFQNYPD
DYQVIRELAD QGQLTVRIAY NLFTQKPKEE LADFKNWTGS VKYGQGSDFF RHNGAGEMLV
FSAADFEDFL EPRPDLPQTM EQELEPVVRH LVEQRWPFRL HATYDESISR MLDVFEKVDR
DIPFNGLPWF FDHAETITPR NIERVRALGG GIAIQDRMAF QGEYFVDRYG AKAAEATPPI
QRMLAEGVPV GAGTDATRVS SYNPWTSLYW LVSGRTVGGM ALYPQGLPRE TALQLFTHGS
AWFSSEQGKK GQIKVGQLAD LAALSADFFS VEEEAIKWIE SVLTVVDGKI VYAAAEFDKL
GPPAPPVLPD WSPVAKVPGH WRQGAPLTAQ VHQCVGACAV HAHEHNRARH SNVPVSDFQG
FWGAFGCSCF AF
|
|---|
| |