Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28800 |
Symbol | |
ID | 4380745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2479279 |
End bp | 2480274 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639324886 |
Product | hypothetical protein |
Protein accession | YP_790458 |
Protein GI | 116050721 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000287413 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000000000406133 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGAAAAT ACCAGCCACC GTTGACGTTA ACGCCACGCA TGTTGGCGCT GGCTGCCGAG ATTGGGGAGC GTGTTGGGCA TTTGTCCGCT CTGCATGAAG GGGCGCTGAC GCCGCAACTG CGTCGGGGTA ACCGCATCCG TACTATCCAG GCGTCACTCG CTATTGAGAA CAACACGTTA AGCGTCGAGC AGGTCACTGC TGTGTTGGAT GGCAAGCGTG TGCTTGGTTT GCCGCGTGAA ATTCAGGAAG TGCGCAATGC CTTTTCAGCC TACGAGGTGA TGCCCGAGTG GCAACCGAGT TTGCGTGATG ATTTACTGGC AGCCCACGCG CTGCTGATGC ACGGGCTGAT CGATGATGCC GGTAGCTATC GGCGCGGGGG TGTAGGCATC TATCGAGGAG AACGTTTGCT GCACATGGCA CCACCGGCCA ACCGGGTTCC GCAGTTGATG GACGATTTGC TGGCATGGCT GAGCCGCTGC GAGCTGCATC CACTGATCGC CAGTTGCGTG TTCCATTACG AGTTCGAGTT CATCCACCCC TTCGCAGATG GCAATGGGCG AATGGGGCGC CTATGGCAAA CCTTGATACT CAGCCAATGG CGAGCGGTTC TTGCGTATTT GCCCGTCGAG AGTGTGATTC GCGAGCAGCA GGATGCTTAT TACGAGGCAT TGGCTGTTTC TGACAAGGCA GCAGAGGCGG CGCCTTTTGT CGAATTCATG CTGGCTGCCC TGCGTCAGGC ATTGCTTGAA GGTGTTTCAG GCGATCAAGT AAGCGATCAA GTAAGCGATC AAGTAGCACG CCTGCTGCAA GCGTTACCGC CAGGTGAGGC CCTCAAAGCC AGCGAATTGA TGCAGCGCTT AGGGCTGGCG CACCGTCCGA CCTTTAGCAA CAACTACCTC AAGCCTGCCC TGGTTGCCGG CTTGATCGAG ATGACCGACC CCGCGTCGCC GCGCAGTCCG GCACAGAAGT ACCGGCGAAC TGGGTTTTCC AAGTAA
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Protein sequence | MRKYQPPLTL TPRMLALAAE IGERVGHLSA LHEGALTPQL RRGNRIRTIQ ASLAIENNTL SVEQVTAVLD GKRVLGLPRE IQEVRNAFSA YEVMPEWQPS LRDDLLAAHA LLMHGLIDDA GSYRRGGVGI YRGERLLHMA PPANRVPQLM DDLLAWLSRC ELHPLIASCV FHYEFEFIHP FADGNGRMGR LWQTLILSQW RAVLAYLPVE SVIREQQDAY YEALAVSDKA AEAAPFVEFM LAALRQALLE GVSGDQVSDQ VSDQVARLLQ ALPPGEALKA SELMQRLGLA HRPTFSNNYL KPALVAGLIE MTDPASPRSP AQKYRRTGFS K
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