Gene PA14_28780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28780 
Symbol 
ID4380747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2478590 
End bp2478874 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content52% 
IMG OID639324884 
Producthypothetical protein 
Protein accessionYP_790456 
Protein GI116050723 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000786477 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000000000210809 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGATGGACC TTGTGTATGT CCCCCGGAGG TGGTTAATGG AGCAAGGCGC CGTGTTTCAG 
AATAACTGTA GCCAGGCTGT GTGTTTGTCC AAAGCAGCTG CGTTGTCAGG TGAGGTGAAG
CGTGTCGACA TCGTTGTGGT TGGCAGGACC AAGATCATCA TACCGGCAGG TGAGGTCTGG
GAAAGTTGGT TCGATGATAA GGGCGTGACG GCTGGTTTAT GCCTGAACGA GATCAATTAT
CAGGTAAGGC GAGCGAGGCG TTTTGATGCT GAAGTATCAT GCTGA
 
Protein sequence
MMDLVYVPRR WLMEQGAVFQ NNCSQAVCLS KAAALSGEVK RVDIVVVGRT KIIIPAGEVW 
ESWFDDKGVT AGLCLNEINY QVRRARRFDA EVSC