Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28770 |
Symbol | |
ID | 4380748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2476671 |
End bp | 2478314 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639324883 |
Product | hypothetical protein |
Protein accession | YP_790455 |
Protein GI | 116050724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000181645 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000000073991 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATAATC TGAAAACACG AATCGTCAAT TCATACAATG ACCTGTCAGC GGACGCTGAC TCATTTTCGG AGTCGAGCGG AAAGTCGCGA ACTGTGGTGG AGCCAGTGCT CAGGCTGTTG CGCAAGGCGT TACTCTTGGA TATTTCCGGT GGCGAAAAGC GAGTTCCTGA TGCTGATGAA ATCAAAGACT GGGTGCTGAA ACTATTCGCG AAAAATCCCA CCGTTGGTGA CATGGTGCGA GCCCTTCTAT TGATTAAGGA GGATCTAGTT GTTAGCGAGC ACCAACTGCC TTCTATCGAA GAGGCACTGC GCGAAATCGG CCTATTGGAG CAGCTCCACT TGCCAGACTT CTTCTTCGTT TCCTCGGAGT TGGAGGGAGA GCCTTGTGGT GTACTGTTCG AACGTTATGA ATCGGACGGT GAAGTCCTCG TGTTTCTGGC CACTCTCTTC GATAAGAAGA ACCTAATGCA AAAGGTTGGC AGGATGGCGA TTCGTGTCAG CAAAGAGTCT CCTGAGCCTT TCTTGTCCAT CTGTACCCCG GACGGCTGGC TTAGGGTGCC AAAAAATCAG ATCGTGCCGG GTTCAGTCAG TTCCTTCACG GTCCAATGCC TGCTTGAATA TAAGTATTAC ATTTATCCCA CTCTGCCCTT GAGCTCCATT ATTGCTCCCG AATTGACTAG GAGAAAGGAT AACATTCATT TAGTAAGCCT GATAAAAGAG GCTTATCTGG ACAAAGTAGT TTGCACACGA GTCCGCGTTC CCCTAGACGT CGTGCAACCA CGAGACATCG ACTATGCACT GCATACGCCG GATGAGCAGA TACGAGATTG TATGCCTTAT GCGGCACATA CTGAGTTCCT GCTATACGAA GAGGATGGAG TGCTTATCAT GGATGATGAC TATACCCCGT ATTTAGCCTG CCAAGCGCTC AGGGTCAAGG AAGTCACAGC GGTCATCTTG GGTAAGTTTA ACCAGTCGCG GGCCAAAGTT CTTTCCATTG GGTACAGCGA GCTTATGTCT CCCATCTCCG TTTCACCCAG TGCACACCAG TCGCAGAAGC GCCTTAGAGA CAAGCAAGAG CTTCTTAAGA AAAAATTACA ATCCCTGAGG CCTTCCTTCC TCCCGGCGGC AAAAATGGAG AGGAGTTTCA TTGAGTTGTG CTGGTTACTG AACAGGGTTA AAACTCGGGA AAGAGATCTA CACAGATTCC TGAAGGAAAA TTACCAGATA CTGGACTCTC ACCTGGCGGC AATCTTCAGC GAAGTACCCA TAGGCAAGTA TCGGGCAGAC CTAGTTCTGC AGTATCACCA GTCTGACAAG CGTGTGGTGC TGGTCGAACT TGAGCCACAC GATAAGAAAA TTTTTACCAA AAAAAATCGC CTTAGGCACC AGGTGACTCA TGCTCTACAG CAGGTAGAAG ATTGGATACA GGAAATACAT AGAGGCGTAC CCAATATACC AGGCTGGCTT CAGGGAAGTT ACACTGCAGA AGGCATGATA GTTATTGGAC GCTCGAAAGA CCTGACAGAA GAGCAGAGGG AAACTCTCGC GCTGAAGAAT GCCAAATCCA GCATCAAGAT ACTGACCTAC GATGATTTGC TGGAGCGCCT GTCTCGGCTT ATAAAAACGC TTGACAAGGA ATAG
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Protein sequence | MDNLKTRIVN SYNDLSADAD SFSESSGKSR TVVEPVLRLL RKALLLDISG GEKRVPDADE IKDWVLKLFA KNPTVGDMVR ALLLIKEDLV VSEHQLPSIE EALREIGLLE QLHLPDFFFV SSELEGEPCG VLFERYESDG EVLVFLATLF DKKNLMQKVG RMAIRVSKES PEPFLSICTP DGWLRVPKNQ IVPGSVSSFT VQCLLEYKYY IYPTLPLSSI IAPELTRRKD NIHLVSLIKE AYLDKVVCTR VRVPLDVVQP RDIDYALHTP DEQIRDCMPY AAHTEFLLYE EDGVLIMDDD YTPYLACQAL RVKEVTAVIL GKFNQSRAKV LSIGYSELMS PISVSPSAHQ SQKRLRDKQE LLKKKLQSLR PSFLPAAKME RSFIELCWLL NRVKTRERDL HRFLKENYQI LDSHLAAIFS EVPIGKYRAD LVLQYHQSDK RVVLVELEPH DKKIFTKKNR LRHQVTHALQ QVEDWIQEIH RGVPNIPGWL QGSYTAEGMI VIGRSKDLTE EQRETLALKN AKSSIKILTY DDLLERLSRL IKTLDKE
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