Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28530 |
Symbol | |
ID | 4380768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2460195 |
End bp | 2461094 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639324862 |
Product | hypothetical protein |
Protein accession | YP_790435 |
Protein GI | 116050744 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00021661 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCCGTA CGGCTTATCG GGAAATAGGC CTGTTCGGCC TGGTCAAGCG CACCGTGAAC GAGTTCCTCG AGGACGACAT GCCGACCTAC GCCTCGGCCC TCGCCTACCA GATGCTGTTC TCGCTGTTTC CGTTCCTGCT GGTGCTGATC ACCCTCGTAG GCTACCTGCA CCTGCCGGAG TTCTTCGCCT GGCTGCGCGA GCAGGCGGCG TTGCTGCTGC CGCCCGAGGC GATGGATCAG GTCAACCCGG TGATCGACCA GTTGCAGCAG CAGAAAGGCG GCCTGCTGTC GATCGGTATC GCGGTGGCGC TGTGGACCTC CTCGGCGGGC ATCCGCTCGA TGATGATCGC GCTCAACGCC GCCTACGACG TGAAGGAGAG CCGCCCGGTA TGGAAGCGCT TCTCCCTGTC GATCCTCTAC ACCCTCGGCA TCGCCCTGTT GTTGCTGGTG GCGGCCGGCC TGATGGTCAC CGGGCCGCAG GTAATCGCCT GGATCGCCGG CCTGGTCGGT CTGGAACAGT ACCTGGTGAC GCTCTGGACC TGGCTGCGCT GGCCTCTTGC GGTGTTCCTG CTGATGCTCG CGGTGGCGCT GTTCTACTAC TTGGTGCCGG ATGTCGAGCA GCGTTTCCGC TTCATCACTC CCGGCTCGGT GCTCTCGGTG ATCGCCTGGA TCGCCGCGTC CCTCGCCTAC GGCTTCTACG TGAAGAACTT CGCCAACTAC AACGCCATGT ACGGCAGCAT CGGGGCGATC ATCATCCTCC TGCTGTACTT CTACCTGTCG GCGGCAGTGG TGCTGTTCGG CGCAGAACTG AACGCGGTGA TCGAACACCA TTCGGAAGAC GGCAAGGACC CTGGCGAACG CGAACTTCCG GACAACGACG ACCCCGAACT CAAGGCTTGA
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Protein sequence | MFRTAYREIG LFGLVKRTVN EFLEDDMPTY ASALAYQMLF SLFPFLLVLI TLVGYLHLPE FFAWLREQAA LLLPPEAMDQ VNPVIDQLQQ QKGGLLSIGI AVALWTSSAG IRSMMIALNA AYDVKESRPV WKRFSLSILY TLGIALLLLV AAGLMVTGPQ VIAWIAGLVG LEQYLVTLWT WLRWPLAVFL LMLAVALFYY LVPDVEQRFR FITPGSVLSV IAWIAASLAY GFYVKNFANY NAMYGSIGAI IILLLYFYLS AAVVLFGAEL NAVIEHHSED GKDPGERELP DNDDPELKA
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