Gene PA14_28530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28530 
Symbol 
ID4380768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2460195 
End bp2461094 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID639324862 
Producthypothetical protein 
Protein accessionYP_790435 
Protein GI116050744 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00021661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCCGTA CGGCTTATCG GGAAATAGGC CTGTTCGGCC TGGTCAAGCG CACCGTGAAC 
GAGTTCCTCG AGGACGACAT GCCGACCTAC GCCTCGGCCC TCGCCTACCA GATGCTGTTC
TCGCTGTTTC CGTTCCTGCT GGTGCTGATC ACCCTCGTAG GCTACCTGCA CCTGCCGGAG
TTCTTCGCCT GGCTGCGCGA GCAGGCGGCG TTGCTGCTGC CGCCCGAGGC GATGGATCAG
GTCAACCCGG TGATCGACCA GTTGCAGCAG CAGAAAGGCG GCCTGCTGTC GATCGGTATC
GCGGTGGCGC TGTGGACCTC CTCGGCGGGC ATCCGCTCGA TGATGATCGC GCTCAACGCC
GCCTACGACG TGAAGGAGAG CCGCCCGGTA TGGAAGCGCT TCTCCCTGTC GATCCTCTAC
ACCCTCGGCA TCGCCCTGTT GTTGCTGGTG GCGGCCGGCC TGATGGTCAC CGGGCCGCAG
GTAATCGCCT GGATCGCCGG CCTGGTCGGT CTGGAACAGT ACCTGGTGAC GCTCTGGACC
TGGCTGCGCT GGCCTCTTGC GGTGTTCCTG CTGATGCTCG CGGTGGCGCT GTTCTACTAC
TTGGTGCCGG ATGTCGAGCA GCGTTTCCGC TTCATCACTC CCGGCTCGGT GCTCTCGGTG
ATCGCCTGGA TCGCCGCGTC CCTCGCCTAC GGCTTCTACG TGAAGAACTT CGCCAACTAC
AACGCCATGT ACGGCAGCAT CGGGGCGATC ATCATCCTCC TGCTGTACTT CTACCTGTCG
GCGGCAGTGG TGCTGTTCGG CGCAGAACTG AACGCGGTGA TCGAACACCA TTCGGAAGAC
GGCAAGGACC CTGGCGAACG CGAACTTCCG GACAACGACG ACCCCGAACT CAAGGCTTGA
 
Protein sequence
MFRTAYREIG LFGLVKRTVN EFLEDDMPTY ASALAYQMLF SLFPFLLVLI TLVGYLHLPE 
FFAWLREQAA LLLPPEAMDQ VNPVIDQLQQ QKGGLLSIGI AVALWTSSAG IRSMMIALNA
AYDVKESRPV WKRFSLSILY TLGIALLLLV AAGLMVTGPQ VIAWIAGLVG LEQYLVTLWT
WLRWPLAVFL LMLAVALFYY LVPDVEQRFR FITPGSVLSV IAWIAASLAY GFYVKNFANY
NAMYGSIGAI IILLLYFYLS AAVVLFGAEL NAVIEHHSED GKDPGERELP DNDDPELKA