| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_28400 |
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| Symbol | |
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| ID | 4380780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2452624 |
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| End bp | 2453901 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639324850 |
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| Product | outer membrane OprD family porin |
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| Protein accession | YP_790423 |
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| Protein GI | 116050756 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.136229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00818285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAAGA AAAGGATTTG CCTGCTGGCA CTGGGCATCG CGACTGCAAG CCAGGCGATG
GCCAATGACC AAGAAGCAGC AAAGGGGTTT GTCGAGGACA GCCACCTCGA TCTGTTCTTC
CGCAATGGCT ACATCAGCCG TGACTACAAA CATGGCCGGC AGGACAAGGC CGAATGGGGC
CAGGCCGCCA CTGCCACCTT CACCTCCGGC TTCACCCAGG GGACGGTGGG CGTCGGTGTC
GACGCGTTCG GCCTGTACGC GGTACGCCTG GACGGCGGCA AGGGTCGTAG CGGCGCCGCC
GGTATCGACT TCTTCAAGCA GGGCGACAGC GGCTCCGCGG CGGACGATCT GTCCAAGGGC
GGCGCGGCGG TGAAGTTCCG CATCTCCAAC ACCGTGCTCA AGTACGGCGA CCAGATGCCC
AGCCTGCCGG TGCTCAGCTA CGACAACTCG CGCCTGCTCC CGGAAAGCTA CAGCGGCACC
CTGATCACCT CCAAGGAGAT CGAGGGCCTG GAGCTGAACG CCGGTCGCTT CACCGCGGAA
TCCCGCAAGA GCGCCGAAGG GCGCGACAGC GGCGGCCTGA AGAGCATCAA CGTGTTCGGC
GGCAAGTACG CCTTCACCGA TCACTTCAAC GCCTCGCTGT ACGCTTCCGA CGTCGAGGAC
GTACTGAAGA AGCAGTACAT CAACCTGAAC TACACCATCC CGCTGCAGGC CGACCAGTCG
CTGAACTTCG ACTTCAACGG CTATCGCACC AAGCTGGACA GCGACTTCGC CGACCAGAAC
TTCAACGGTA ACCGCGACAA CAAGATCTGG AGCCTGGCGG CGTCCTACAC CATCGACGCC
CACACCTTCA TGATCGCCCA CCAGCGCAAC ACCGGCGACA CCGGCTACAA CTACGGCTGG
TACCAGAACG CCGGCGGCAT CGGCGACGGC GGCACCACCA TCTGGCTGGC CAACTCCTAC
TGGTCGGACT TCAACGCCGA GGACGAGCGT TCCTGGCAGG TCAGCTACGC CCTGGACTTC
GCCAAGTACG GCGTGCCCGG CCTGACCTAC CGCGTAGCCT ACGTGCGCGG CGACAACATC
AAGACCGCCG AGACCAGCAA CGGCAAGGAG CGCGAGATCT TCAACCAGGT CCAGTACGTG
GTGCAGAGCG GTCCGGCCAA GGACCTCACC CTGCGTCTGC GCAGCTCGTT CCTGCGTGTC
TCCAACGACG CCCGCTCGTA CAACGACGAC GGCAACGAAA TCCGTGCCTT CGTCGAGTAC
CCGTTCAGCG TGTTCTGA
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| Protein sequence | MLKKRICLLA LGIATASQAM ANDQEAAKGF VEDSHLDLFF RNGYISRDYK HGRQDKAEWG
QAATATFTSG FTQGTVGVGV DAFGLYAVRL DGGKGRSGAA GIDFFKQGDS GSAADDLSKG
GAAVKFRISN TVLKYGDQMP SLPVLSYDNS RLLPESYSGT LITSKEIEGL ELNAGRFTAE
SRKSAEGRDS GGLKSINVFG GKYAFTDHFN ASLYASDVED VLKKQYINLN YTIPLQADQS
LNFDFNGYRT KLDSDFADQN FNGNRDNKIW SLAASYTIDA HTFMIAHQRN TGDTGYNYGW
YQNAGGIGDG GTTIWLANSY WSDFNAEDER SWQVSYALDF AKYGVPGLTY RVAYVRGDNI
KTAETSNGKE REIFNQVQYV VQSGPAKDLT LRLRSSFLRV SNDARSYNDD GNEIRAFVEY
PFSVF
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