| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_28340 |
|---|
| Symbol | |
|---|
| ID | 4380786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2448732 |
|---|
| End bp | 2449631 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790417 |
|---|
| Protein GI | 116050762 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.569252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATG GAGGCAACAT GAGCGCGGCT CAGCCAGGCA TTCTCACCCC GATTCCGGTG
GTGGGTCGCT ACCTGTTTTT CAGCATTTCC CAACCCGAGC AGGTGGCCGC GACCTTGGCC
AGCCTGGCCG CGGCCACCGA TGGTTACCAG CTGGTGGTGG GTATCGGCCA TTCGCTGATG
CTCAGCCTCG GCAAGACCGT CGAGGGCATG AAGGACTATC CGGTGCTCGC CGCGCCCGGC
ATCGACCTGC CGTCCACGCC CTCCGCGCTG TGGTGCTGGC TGCGCGGCGA GGATCGCGGC
GAGGTGACGC TGCGCTCGCA CGCGCTGGAA CGGTCGCTGG CGCCGGCCTT CCAGCGGACC
GGCGCGGTGG ATGCGTTCCT CTACGGCGAG GACCGCGACC TGTCCGGCTA CAAGGACGGC
ACCGAGAACC CCAAGGGCGA TGCGGCGCTC GAAGCCGCGC TGGTCTCCGG GCGCGGTGCG
GGCCTGGATG GCGGCAGTTT CGTTGCTGTC CAGCAGTGGC TGCATGACTT CGACCGGATG
CAGGCGATCC CCGGCGAGGA GATGGACAAC ATCATCGGCC GCCGCAAGTC CGACGATGAA
GAACTGGAAG ACGCGCCGGC CTACGCCCAC GTCAAGCGCA CCGAGCAGGA AAGCTTCGAG
CCCGCCGCGT TCCTCCTGCG GCGCGGCGCG CCCTGGTCCG ACGAGCACCG CGCGGGGCTG
TTGTTCGCCG CCTTCGGCCG CTCGTTCGAG GCCTTCGAGG TCCAGTGGCT ACGGATGATC
GGCGTGGAAG ACGGGGTGCT CGATGGCCTG TTCCGTTTCA CCCGGCCGAT CAGCGGCAGC
TACTTCTGGT GTCCGCCCAT GGCCGACGGC CGCCTCGACC TGTCCGCCCT CGGCCTCTGA
|
|---|
| Protein sequence | MIDGGNMSAA QPGILTPIPV VGRYLFFSIS QPEQVAATLA SLAAATDGYQ LVVGIGHSLM
LSLGKTVEGM KDYPVLAAPG IDLPSTPSAL WCWLRGEDRG EVTLRSHALE RSLAPAFQRT
GAVDAFLYGE DRDLSGYKDG TENPKGDAAL EAALVSGRGA GLDGGSFVAV QQWLHDFDRM
QAIPGEEMDN IIGRRKSDDE ELEDAPAYAH VKRTEQESFE PAAFLLRRGA PWSDEHRAGL
LFAAFGRSFE AFEVQWLRMI GVEDGVLDGL FRFTRPISGS YFWCPPMADG RLDLSALGL
|
|---|
| |