| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_28320 |
|---|
| Symbol | |
|---|
| ID | 4380788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2447809 |
|---|
| End bp | 2448390 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324842 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_790415 |
|---|
| Protein GI | 116050764 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.115035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACA AACCGGAACA GAAACAGGCC ACCCGCGCCC TGTTGTTGAG CAAGGCCGCT
CCGCTGGTGA AGCGCCAGGG CTTCGCCAGC ACCGGCCTGG ACACCTTGAT GAAGGCGGCT
GGTCTTACTA CCGGGGCGTT CTACTCGCAA TTCTCCAGCA AGGCGGAGTT GCTCGAAGCG
ATCCTGCAGC GCGAGCTGAG CGCCCAGCAC GATGCCTTTC CGCTGGACAG CCTGGAGCAA
CTGGCCGGCG CCACCCGTCT CTACCTCAGT CGCGGTCATG CGCAGCATGC CGACATGGGC
TGCCCGATTC CGGCGCTGGC CGCCGAGGTG GGCCGGGCAG GGCCCGAGGT GCGGGAAACC
TTCGAACGCG CCCTGGAACA ACGGCAACGG CGGCTGGCCG AACTGATGGG CGACGAGAAC
CGGGCCTGGG TGCTCACCTG CCTGTCGGTC GGCGCGGTGC TTCTCGCGCG TGCCCAGGCG
AGCGAGGTGG CGCGCGACAA GGTCCTGGAT GCGGCGCTGG AGCATGCGCT GGGCCTGCTT
TCGGCGAGCG GAGCGGTTTC GCCGCAAGCG GACCGGGACT GA
|
|---|
| Protein sequence | MRYKPEQKQA TRALLLSKAA PLVKRQGFAS TGLDTLMKAA GLTTGAFYSQ FSSKAELLEA
ILQRELSAQH DAFPLDSLEQ LAGATRLYLS RGHAQHADMG CPIPALAAEV GRAGPEVRET
FERALEQRQR RLAELMGDEN RAWVLTCLSV GAVLLARAQA SEVARDKVLD AALEHALGLL
SASGAVSPQA DRD
|
|---|
| |