Gene PA14_28180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28180 
Symbol 
ID4380800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2439277 
End bp2440560 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content66% 
IMG OID639324829 
Producthypothetical protein 
Protein accessionYP_790403 
Protein GI116050776 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0347636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACA CCCCCTACCC CTCCTCCTAT TACGCCGCGT CGGCCAATCC CGCGCCGCCC 
CGCCCGGAAC TCCAGGGCGA GGTCGAAACC GACGTCTGCG TGATCGGTGC CGGCTATACC
GGCCTCTCCA CCGCCCTGTT CCTGCTGGAG AATGGTTTCA AGGTCACCGT ACTGGAAGCC
GCCAAGGTCG GCTTCGGCGC TTCCGGGCGC AACGGCGGCC AGATCGTCAA CAGCTACAGC
CGCGACATCG ACGTGATCGA GCGCACCGTC GGCAAGCGCG AAGCGCAGTT GCTCGGCGAG
ATGGCCTTCG AAGGCGGGCG CATCATCCGC GAGCGCGTGG CCCGCTACGG TATCCAGTGC
GACCTGAAGG ACGGCGGGGT GTTCGCCGCC TTCACCGAGA AGCAGATGGA TCACCTGCGC
GCACAGAAAC AGTTGTGGGA ACGCTACGGC CACAACCAGT TGGAGATCAT GGACGCCAAG
CGCATCCGCG AGGTGGTGGC GACCGACAAC TATATAGGCG GCATGCTCGA CATGAGCGGC
GGCCACATCC ATCCGCTGAA CCTCGCCCTC GGCGAAGCGG CGGCAGTGGA GTCACTTGGC
GGCAGAATCT ACGAGCAGAG CCCGGCGACC CGCATCGAGC GCGGCGCCAG CCCGGTGGTG
CATACCCCGC AAGGCAAAGT GAAGGCGAAG TTCATCGTGG TCGCCGGTAA CGCCTACCTC
AACGGTCTGG TCCCGGAACT GGCGGCCAAG TCGATGCCCT GCGGCACCCA GGTGATCACC
ACCGAGCCGC TGAACGAGGA ACTGGCCCAC AGCCTGCTGC CGCAGGACTA CTGCGTGGAA
GACTGCAATT ACCTGCTCGA CTACTATCGC CTCTCCGGCG ACAAGCGCCT GATCTACGGT
GGCGGCGTGA TCTATGGCGC TCGCGATCCG GCGGACATCG AGGCGATCAT CCGGCCGAAG
ATGCTCAAGA CCTTCCCGCA ACTGAAGGAC GTGAAGATCG ACTTCGCCTG GACCGGCAAC
TTCCTGCTGA CCCTCTCGCG CCTGCCCCAG GTCGGCCGCA TCGGCGACAA CATCTACTAT
TCCCAGGGTT GCAGCGGCCA CGGCGTGACC TACACCCACG TCGCCGGCAA GGTCCTGGCC
GAAGCCCTGC GCGGCCAGGC CGAGCGCTTC GACGCTTTCG CCGGCCTGCC GCACTACCCC
TTCCCCGGCG GCAAGCTGTT CCGCGTACCG TTCACCGCCA TCGGCGCCTG GTACTACAGC
CTGCGCGACA AGCTCGGGGT CTAG
 
Protein sequence
MPHTPYPSSY YAASANPAPP RPELQGEVET DVCVIGAGYT GLSTALFLLE NGFKVTVLEA 
AKVGFGASGR NGGQIVNSYS RDIDVIERTV GKREAQLLGE MAFEGGRIIR ERVARYGIQC
DLKDGGVFAA FTEKQMDHLR AQKQLWERYG HNQLEIMDAK RIREVVATDN YIGGMLDMSG
GHIHPLNLAL GEAAAVESLG GRIYEQSPAT RIERGASPVV HTPQGKVKAK FIVVAGNAYL
NGLVPELAAK SMPCGTQVIT TEPLNEELAH SLLPQDYCVE DCNYLLDYYR LSGDKRLIYG
GGVIYGARDP ADIEAIIRPK MLKTFPQLKD VKIDFAWTGN FLLTLSRLPQ VGRIGDNIYY
SQGCSGHGVT YTHVAGKVLA EALRGQAERF DAFAGLPHYP FPGGKLFRVP FTAIGAWYYS
LRDKLGV