| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_28150 |
|---|
| Symbol | |
|---|
| ID | 4380802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2437310 |
|---|
| End bp | 2438188 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639324827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790401 |
|---|
| Protein GI | 116050778 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0121186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTGCCCGCAC GGGTGGAGCT GCGCGACGTG CCGTTCTTCC CTCAGGAAGC CTACCAGTGC
GGTCCCGCCG CGCTGGCCAC GATGCTCGGC CAGCGCGGCC TGGCGTTGAC GCCGGGACAA
TTGAAGGACG AGGTGTTCAT TCCCGGTCGC GAGGGCAGCT TGCAGTTGGA GATGGTCGCC
GCGGCGCGCC GCCACGGCAT GCTGGTCTAT CCGCTGCAAG GCGGACTGGA GAGCGTGCTC
GAGGAGGTCG CGGCGGGCAA CCCGGTGCTG GTGCTACAGA ACCAGGCTTT CTCCTGGTGG
CCGCGCTGGC ACTTCGCGGT GGTGGTCGGC TTCGATCGGG AGCGCCGCGA ACTGGTGCTG
CGCTCGGGCA TCACCCGGCG CTGGGTCACC GACTTCACCA GCTTCGAATC GACCTGGAAG
CGTTCGGGAC GCTGGGCGGT GCTGACCCTG CCGGGTGACC GCCTGCCGGC CACGGCAGCG
GCGGTCCCGT GGCTCAAGGC CGCCAGTGAC AGCGAGGAAA CCGGCCACCC CAAGGTTGCC
CGGCGCGCCT ACGAAGAAGC CGTGCGACGC TGGCCTGAGG ACGCCTTCGC CTGGTTCGCC
CTGGGCAACA GTCGCTACGC CGCAGGCGAT TCCGCCGCTG CCGAACAGGC CATGCTCACC
AGCGTCGAGC GTCGCGCGGA TTTCGCCGCG GGTTGGTTCA ACCTGTCCCA GTTGCTGGCG
GAACGCGGTT GCGCGGCGCC GGCGCGCCAG GCGCAGGCCT GCGCGCGGGC ATTGCAGCCT
GGGGAAGCCC GCTTCGCTGC GGCCTTGCCG CAGGCCGTCG CACCCGCGGC TCGGTGCGCC
GAGCTGCCGG CCTGTCCCGT TGGCGCACCG CCCCGCTGA
|
|---|
| Protein sequence | MPARVELRDV PFFPQEAYQC GPAALATMLG QRGLALTPGQ LKDEVFIPGR EGSLQLEMVA
AARRHGMLVY PLQGGLESVL EEVAAGNPVL VLQNQAFSWW PRWHFAVVVG FDRERRELVL
RSGITRRWVT DFTSFESTWK RSGRWAVLTL PGDRLPATAA AVPWLKAASD SEETGHPKVA
RRAYEEAVRR WPEDAFAWFA LGNSRYAAGD SAAAEQAMLT SVERRADFAA GWFNLSQLLA
ERGCAAPARQ AQACARALQP GEARFAAALP QAVAPAARCA ELPACPVGAP PR
|
|---|
| |