Gene PA14_27990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_27990 
Symbol 
ID4380818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2422054 
End bp2423370 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content48% 
IMG OID639324811 
Productputative sialidase 
Protein accessionYP_790385 
Protein GI116050794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.126788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTT ATTTTGATAT TCCGCATCGG TTAGTGGGAA AGGCTCTGTA TGAATCATAT 
TATGATCATT TTGGCCAAAT GGATATATTG TCAGATGGAG GTTTGTACCT AATATATAGG
CGGGCAACAG AGCATGTAGG TGGTAGTGAT GGGCGTGTTG TTTTCAGTAA ACTGGAAGGT
GGTATTTGGA GTGCGCCTAC AATAGTTGCC CAGGCGGGAG GACAGGATTT TCGAGATGTA
GCTGGTGGGA CGATGCCTAG CGGAAGGATC GTCGCGGCCT CGACGGTTTA TGAAACAGGA
GAGGTGAAGG TCTATGTATC TGATGATTCA GGTGTGACAT GGGTACATAA ATTCACATTG
GCTAGAGGTG GGGCGGATTA TAATTTTGCT CATGGAAAAA GTTTTCAAGT AGGGGCGCGC
TATGTGATTC CTCTTTACGC GGCGACGGGA GTCAATTATG AACTGAAATG GCTAGAGTCT
TCTGATGGCG GAGAAACGTG GGGCGAAGGA AGCACGATCT ACAGCGGGAA CACACCATAC
AATGAGACTT CTTACCTTCC TGTGGGAGAT GGCGTAATTC TGGCTGTAGC CAGAGTAGGA
TCTGGTGCCG GAGGAGCGTT ACGTCAGTTT ATAAGTCTGG ACGACGGCGG CACATGGACT
GATCAGGGTA ATGTGACTGC ACAAAATGGT GACTCTACCG ATATTCTCGT AGCCCCTTCT
CTCTCCTATG TTTATTCTGA GGGAGGTACA CCACATGTAG TTCTCTTGTA CACGAACAGA
ACGACTCATT TTTGTTATTA CAGAACAATC CTGCTGGCGA AAGCCGTAGC AGGCTCCTCC
GGCTGGACGG AGCGTGTTCC TGTGTATAGT GCGCCAGCCG TCTCCGGTTA TACTAGTCAA
GTCGTTTTGG GAGGTCGGAG AATACTGGGT AATCTATTCA GGGAGACATC TTCTACGACG
TCGGGAGCTT ATCAGTTTGA AGTGTATCTG GGAGGAGTCC CGGATTTTGA GTCAGACTGG
TTTTCTGTTT CTTCAAATAG TTTGTATACC CTGAGTCATG GACTCCAGAG GTCGCCGCGT
CGGGTGGTCG TTGAGTTTGC AAGGTCATCG AGTCCATCAA CATGGAACAT TGTCATGCCC
AGTTATTTCA ATGATGGAGG GCATAAAGGC AGTGGGGCTC AGGTTGAAGT GGGTAGCTTG
AATATTCGGC TTGGAACTGG AGCGGCAGTA TGGGGCACGG GATATTTCGG AGGAATCGAC
AATAGTGCCA CGACTCGATT CGCTACCGGG TATTATCGGG TCAGAGCATG GATTTAG
 
Protein sequence
MNTYFDIPHR LVGKALYESY YDHFGQMDIL SDGGLYLIYR RATEHVGGSD GRVVFSKLEG 
GIWSAPTIVA QAGGQDFRDV AGGTMPSGRI VAASTVYETG EVKVYVSDDS GVTWVHKFTL
ARGGADYNFA HGKSFQVGAR YVIPLYAATG VNYELKWLES SDGGETWGEG STIYSGNTPY
NETSYLPVGD GVILAVARVG SGAGGALRQF ISLDDGGTWT DQGNVTAQNG DSTDILVAPS
LSYVYSEGGT PHVVLLYTNR TTHFCYYRTI LLAKAVAGSS GWTERVPVYS APAVSGYTSQ
VVLGGRRILG NLFRETSSTT SGAYQFEVYL GGVPDFESDW FSVSSNSLYT LSHGLQRSPR
RVVVEFARSS SPSTWNIVMP SYFNDGGHKG SGAQVEVGSL NIRLGTGAAV WGTGYFGGID
NSATTRFATG YYRVRAWI