Gene PA14_27920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_27920 
Symbol 
ID4380824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2416694 
End bp2417398 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID639324805 
Producthypothetical protein 
Protein accessionYP_790379 
Protein GI116050800 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCC GCGGCGTGAA CTGGATCGAA CGTAGTGCCC GAATCCTGGC TTGCGCCAGC 
CTCGCATTGG CACCCACGCT GTCCCTGGCG GCCAGTGAAG AAGACCCTTG GGAAAGCATC
AACCGTCCCA TCTTCACCTT CAACGACACC CTGGACACCT ATGCGCTGAA ACCGCTGGCC
CAGGGTTACC AGAAGGTCAC CCCGAACTTC GTTCAGGACG GCGTGCACAA CTTCTTCAAC
AACCTCGGCG ACGTGAAGAA CCTGGCCAAC AACCTGTTGC AGGCCAAGTT CCACAATGCC
GGCGTGGACA CCAGCCGCCT GCTGTTCAAC AGCACCTTCG GCCTGGCCGG CTTGATCGAC
GTGGCGACCC CGATGGGCCT GCAGCGCAAC GACGAGGACT TCGGCCAGAC CCTGGGTTAT
TGGGGCGTCG GCAGCGGCCC GTACGTGATG CTGCCGTTCC TCGGCCCGAG CACGCTGCGC
GATGCCCCGG CGAAGATCCC GGACATCTAT GTCGGTCCCT ACCACTACAT GGACGATGTA
CGCGCGCGCA ACGTGATGTT CGGCATCAAC ACCGTCGACA CCCGTGCCAA CCTGCTGAAG
TCGGAAAAAC TGATCAGCGG CGACAAGTAC ATCTTCATCC GCAACGCCTA CCTGCAGAAC
CGCGAGTTCA AGGTCAAGGA CGGCGAGGTG GAGGACGACT TCTAA
 
Protein sequence
MRARGVNWIE RSARILACAS LALAPTLSLA ASEEDPWESI NRPIFTFNDT LDTYALKPLA 
QGYQKVTPNF VQDGVHNFFN NLGDVKNLAN NLLQAKFHNA GVDTSRLLFN STFGLAGLID
VATPMGLQRN DEDFGQTLGY WGVGSGPYVM LPFLGPSTLR DAPAKIPDIY VGPYHYMDDV
RARNVMFGIN TVDTRANLLK SEKLISGDKY IFIRNAYLQN REFKVKDGEV EDDF