Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_27920 |
Symbol | |
ID | 4380824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2416694 |
End bp | 2417398 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639324805 |
Product | hypothetical protein |
Protein accession | YP_790379 |
Protein GI | 116050800 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCC GCGGCGTGAA CTGGATCGAA CGTAGTGCCC GAATCCTGGC TTGCGCCAGC CTCGCATTGG CACCCACGCT GTCCCTGGCG GCCAGTGAAG AAGACCCTTG GGAAAGCATC AACCGTCCCA TCTTCACCTT CAACGACACC CTGGACACCT ATGCGCTGAA ACCGCTGGCC CAGGGTTACC AGAAGGTCAC CCCGAACTTC GTTCAGGACG GCGTGCACAA CTTCTTCAAC AACCTCGGCG ACGTGAAGAA CCTGGCCAAC AACCTGTTGC AGGCCAAGTT CCACAATGCC GGCGTGGACA CCAGCCGCCT GCTGTTCAAC AGCACCTTCG GCCTGGCCGG CTTGATCGAC GTGGCGACCC CGATGGGCCT GCAGCGCAAC GACGAGGACT TCGGCCAGAC CCTGGGTTAT TGGGGCGTCG GCAGCGGCCC GTACGTGATG CTGCCGTTCC TCGGCCCGAG CACGCTGCGC GATGCCCCGG CGAAGATCCC GGACATCTAT GTCGGTCCCT ACCACTACAT GGACGATGTA CGCGCGCGCA ACGTGATGTT CGGCATCAAC ACCGTCGACA CCCGTGCCAA CCTGCTGAAG TCGGAAAAAC TGATCAGCGG CGACAAGTAC ATCTTCATCC GCAACGCCTA CCTGCAGAAC CGCGAGTTCA AGGTCAAGGA CGGCGAGGTG GAGGACGACT TCTAA
|
Protein sequence | MRARGVNWIE RSARILACAS LALAPTLSLA ASEEDPWESI NRPIFTFNDT LDTYALKPLA QGYQKVTPNF VQDGVHNFFN NLGDVKNLAN NLLQAKFHNA GVDTSRLLFN STFGLAGLID VATPMGLQRN DEDFGQTLGY WGVGSGPYVM LPFLGPSTLR DAPAKIPDIY VGPYHYMDDV RARNVMFGIN TVDTRANLLK SEKLISGDKY IFIRNAYLQN REFKVKDGEV EDDF
|
| |