Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_27730 |
Symbol | fadE |
ID | 4380838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2403705 |
End bp | 2406152 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324790 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_790364 |
Protein GI | 116050814 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0291961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTGC TCTGGTTAGT CGTACTGGTA CTCGGTGTCG CTTACCTCGC CCATCGGCGT ACCCCACCCG CTCCCGCGCT CGGCATCAGC GCCGCCTACC TGATCCTGAT GGGCGTGTTC AGCCACGCGC CCGGCTGGCT GCTGCTGGTC TTCTGGCTGC TCTGGCTGGC GGTGGCGCTT CCCCTCGCCC TGCCCGACCT GCGCCGGCGC GTGCTCAGCG GTCCGCTGTT CGCCTGGTTC CAGAAAGTCC TGCCGCCGAT GTCCGACACC GAGCGCGAGG CCATCGAGGC GGGCACCGTG TGGTGGGATG GCGAATTGTT CAGCGGCCGC CCGGACTGGC AGAAACTGCT CGACTACCCC AAGGCGCAAC TCACCGAAGA AGAGCAGGCC TTCGTCGACG GCCCGACCGA AGAACTCTGC GCCATGGTCA GCGACTGGGA CATCGGCCAG CGCATGGACC TGCCGGAAGA AGCCTGGGCC TTCATCAAGC AGCACGGCTT CTTCGGCCTG ATCATTCCCA AGGAGTACGG CGGCAAGGGC TTCTCCGCCT TCGCCCACTC ACAGGTGGTG ATGAAGCTCG CCACCCGCAG CGGCGACCTG GCCTCGACGG TGATGGTGCC GAACTCCCTC GGCCCGGCCG AGCTGCTGCT CCACTACGGC ACCGACGAGC AGCGCCAGCG CTACCTGCCG AGCCTGGCCA AGGGCGACGA CATCCCCTGC TTCGCCCTCA CCGGCCCCTA CGCGGGCTCC GATGCCGGCG GCATGACCGA CGTCGGCATC GTCTGCAAGG GCGAATGGGA AGGTCGCGAG GTACTCGGCC TGCGCCTGAC CTGGGAAAAG CGCTACATCA CCCTCGGCCC GGTGGCCACC CTCCTCGGCC TGGCCTTCAA GTGCCACGAC CCGGACCATT TGCTGGGCGA CGAGGAGGAC CTGGGCATCA CCCTGGCGCT GATTCCCACC GACACCCCCG GGGTCGAGAT CGGCCGCCGC CACGTGCCGC TGGGCGCCGC CTTCATGAAC GGTCCGAACT CCGGCAAGGA CGTGTTCGTG CCGCTGGAGT ACATCATCGG CGGGCAGGAA ATGATCGGCA AAGGCTGGAT GATGCTGATG AACTGCCTGT CGGTCGGACG CTCCATCTCG CTGCCGGCGG TGGGCACCAG CGCCGGCAAG GCCAGCAGCT ACGTCAGCGG TCGCTACGCC CAGGTCCGCG AGCAGTTCAA CGTGCCGATC GCCGCCTTCG AAGGCATCCA GGAGGCGCTC GCCCGCATCG GCGGCAACGC CTGGCTGATG GACAGCGCGC GAATCCTCAC CGCCAACGCG GTGGACCTCG GCGAGAAGCC CTCGGTGCTT TCGGCGATCC TCAAGTACCA CCTCACCGAG CGCGGCCGCG AGTGCATCGC CCATGCCATG GACATCCATG GCGGCAAGGG CATCATCATG GGCCCGAACA ACTACCTGGG TCGTTCCTGG CAGGGCGCGC CGATCTTCAT CACGGTGGAA GGCGCGAACA TCCTCTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCGAT CCGTTGCCAT CCGTACGTAC TCAAGGAAAT GGAACTGGCC CAGCGCGAGG ACAAGGACCA GGCCGCCCGC GAGTTCGACG CGCTGCTGGT GAAGCACATC GGCTTCGCCG TCGGCAACGC CGCCAGCAGC TTCCTCCTCA GTCTCAGCTG CGGCCACCTC GGCAACGCGC CCGGCGACCG CATCAGCCGT CCCTACTTCC GCGCGCTGAA CCGCCTGGCG GCGTCCTTCG CCCTGCTCGC CGACTTCAGC ATGATGCTGC TGGGCGGCGA ACTGAAGCGC AAGGAACGCC TCTCCGCGCG TCTCGGCGAT GTCCTCAGTT ATCTCTACCT GGGCTCGGCG GCGCTCAAGC GCTACCACGA CCTGGGCAAC CCGGACTACC TGCATCCGCT GCTGCGCTGG GCCATGGAGG AAAACCTCGG CAAGGCCGAG GCGGCGCTGG AGGACCTGCT GAACAACTTC CCCAGCCGCT TCTTCGGCTG CGCGCTGAAG GTCCTGGTAC TGCCGTTCGG CCGCCGGCAC AAAGGGCCGG GCGACGAACT GGACGCCGAG ATCGCGGAAA TCCTCGGCCG TCCGGACGAC GACCCGGCGT TGCAGGCGAT CCTCGCTGGC GCGTTCCTGC CGAAGGACCC GCAGGACCCG GTCGGTGCCC TCGCCCACGC CTTCGACGCG GTACGCGAAA GCGCCGCGCT GGAGAAAACC CTGCACAAGG CGATCAAGGA AGGCAGGGTC CAGCCGCAAG CGGGGCAGAA CCCGATCGAT GCCGGCGCCG CCGCCGGCGT GCTGAGCGCC GAGCAGGCGC AGGCCCTGCA CCAGGCCGAA GCGGCACGGC GCAAGGTGAT CGACGTCGAC GACTTCGCCA AGGAGGAACT GCAACTGGCC GACGGCAGGA TCCGCTGA
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Protein sequence | MLLLWLVVLV LGVAYLAHRR TPPAPALGIS AAYLILMGVF SHAPGWLLLV FWLLWLAVAL PLALPDLRRR VLSGPLFAWF QKVLPPMSDT EREAIEAGTV WWDGELFSGR PDWQKLLDYP KAQLTEEEQA FVDGPTEELC AMVSDWDIGQ RMDLPEEAWA FIKQHGFFGL IIPKEYGGKG FSAFAHSQVV MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRQRYLP SLAKGDDIPC FALTGPYAGS DAGGMTDVGI VCKGEWEGRE VLGLRLTWEK RYITLGPVAT LLGLAFKCHD PDHLLGDEED LGITLALIPT DTPGVEIGRR HVPLGAAFMN GPNSGKDVFV PLEYIIGGQE MIGKGWMMLM NCLSVGRSIS LPAVGTSAGK ASSYVSGRYA QVREQFNVPI AAFEGIQEAL ARIGGNAWLM DSARILTANA VDLGEKPSVL SAILKYHLTE RGRECIAHAM DIHGGKGIIM GPNNYLGRSW QGAPIFITVE GANILSRNLM IFGQGAIRCH PYVLKEMELA QREDKDQAAR EFDALLVKHI GFAVGNAASS FLLSLSCGHL GNAPGDRISR PYFRALNRLA ASFALLADFS MMLLGGELKR KERLSARLGD VLSYLYLGSA ALKRYHDLGN PDYLHPLLRW AMEENLGKAE AALEDLLNNF PSRFFGCALK VLVLPFGRRH KGPGDELDAE IAEILGRPDD DPALQAILAG AFLPKDPQDP VGALAHAFDA VRESAALEKT LHKAIKEGRV QPQAGQNPID AGAAAGVLSA EQAQALHQAE AARRKVIDVD DFAKEELQLA DGRIR
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