| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_27570 |
|---|
| Symbol | |
|---|
| ID | 4380870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2393262 |
|---|
| End bp | 2393744 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639324774 |
|---|
| Product | GAF domain-containing protein |
|---|
| Protein accession | YP_790351 |
|---|
| Protein GI | 116050826 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1956] GAF domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.759844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00184503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC TGCAGCAATC TGGCGCCGGG CTGGCCGGCT ACGCCCTGCT GGCGGCGCAG
GCCGAGGCGC TATTCGCCGA CGAGCGTGAT TTCATCGCCA ACGCCGCGCA GTTCTCCGCC
TTTCTCTTCC ATGAGCTGGG CGACCTGAAC TGGGCCGGCT TCTATCTGAA CCGCAACGAG
GAACTGGTCC TGGGGCCGTT CCAGGGCAAG GTCGCCTGCG TCCGCATTCC CTTCTCCAAG
GGCGTCTGCG GCGCCGCGGC GCGTACCCGG CTGACCCAGC GGGTCGACGA CGTCCACGCG
TTTCCCGGCC ACATCGCCTG CGACAGCGCT TCCAGCAGCG AACTGGTGGT GCCCCTGCTC
AAGGACGGCC GCCTGGTCGC TGTGCTCGAT CTGGACAGCC CGAGCGTGGG ACGCTTCAGC
GCCGAGGACC AGGCCGGGAT CGAAGGCCTG GTGGAGATAT TCCTGCGCCT GACGGACTGC
TGA
|
|---|
| Protein sequence | MIDLQQSGAG LAGYALLAAQ AEALFADERD FIANAAQFSA FLFHELGDLN WAGFYLNRNE
ELVLGPFQGK VACVRIPFSK GVCGAAARTR LTQRVDDVHA FPGHIACDSA SSSELVVPLL
KDGRLVAVLD LDSPSVGRFS AEDQAGIEGL VEIFLRLTDC
|
|---|
| |