Gene PA14_27560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_27560 
Symbol 
ID4380871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2392375 
End bp2393265 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID639324773 
Producthypothetical protein 
Protein accessionYP_790350 
Protein GI116050827 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.818551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00239701 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGATTCCC GATTGAGCGA TTTTCTTGCC CGCGCCGAAA GCGTGCTCGC GCGCCTGGAG 
CCGCTGCTGC CGGCCGTACG CGAAGCCGTC GACTGGGAGC GCAGCCTGGC GGCGCGCTGG
CACCGCGACG GCCGCAGTGG CTACCTGCAG CCGCTGGAGG TCAGCCTCGA CCTGCGCCTG
GCCGACCTGC TGGGCGTAGA GCGGCAGTGC GAGCAACTGG AACGCAACAC CCGCCAGTTC
GTCGCCGGCC AGCCGGCCAA CCACGCGTTG CTCTGGGGGG CCCGCGGGAC CGGCAAGTCC
TCTCTGGTTC GTGCGCTGCT GGCCGAGCTG GCCGGCGCCG GGCTGCGCCT GATCGAGATC
GAGCGCGACC ACCTGGCCGA CCTGCCGCGC GTGGTCGAGC AACTGCAAGG CCTGCCGCAG
CGCTTCGTGC TGTTCTGCGA CGACCTCTCG TTCGATGCCG GGGAAGGCGA CTACCGGGTA
CTCAAGAGCG TGCTCGACGG CTCGCTGGAG CAGGCGCCGG ACAATGTGCT GCTCTACGCC
ACCTCCAACC GCCGGCACCT GGTTTCGGAG AAGCAGAGCG ACAACGAGAA CTGGAAGATG
GTGGACGGCG AGCTGCATCC CAACGAAGCG GTGGAGGACA AGATCGCCTT GTCCGACCGT
TTCGGCCTGT GGCTGTCGTT CTATCCCTTC ACCCAGGAGC ATTTCCTCAG CGTGGTTCGC
CACTGGGTGG ACGTGCTCGC GGAGAAGGCC GGGCTGGCCT GGAGCTGGAG CGAGGAGCTG
GAGAAGGAAG CGATCCGCTG GGCGCTTGGC CGCGGCAACC GCAACGGCCG TTGCGCCTAT
CAGTTCTCCC GCTACTGGGT GGGCAAGCAA CTGCTGGAGC GCCAGGTATG A
 
Protein sequence
MDSRLSDFLA RAESVLARLE PLLPAVREAV DWERSLAARW HRDGRSGYLQ PLEVSLDLRL 
ADLLGVERQC EQLERNTRQF VAGQPANHAL LWGARGTGKS SLVRALLAEL AGAGLRLIEI
ERDHLADLPR VVEQLQGLPQ RFVLFCDDLS FDAGEGDYRV LKSVLDGSLE QAPDNVLLYA
TSNRRHLVSE KQSDNENWKM VDGELHPNEA VEDKIALSDR FGLWLSFYPF TQEHFLSVVR
HWVDVLAEKA GLAWSWSEEL EKEAIRWALG RGNRNGRCAY QFSRYWVGKQ LLERQV