Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_27550 |
Symbol | |
ID | 4380872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2389932 |
End bp | 2392292 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324772 |
Product | putative sensor/response regulator hybrid |
Protein accession | YP_790349 |
Protein GI | 116050828 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00922112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTAGGCG GCAGAACCTC GCCAAGGCTG ATCCCCGCCC CCATGGATAT AGCGCTGACC CATCGCCTGT CGTTCAAACA GGCCAGCCTC ACCGTGCTGG TGGCCTTTAT CCTGGGAACC CTGCTCAGCC TGATTCAGGT TGGCGTCGAT TATGCCAGCC AGGACGCATC CATCAATCGC GAAGTGCGCG CGCTGCTGGA CGTCAGCCAC AACCCCGCCG CGCGAATCGC CTACAACATC GATGCGGAGC TGGCCCAGGA GCTGGTCCTC GGCCTGCTGC GTTCGCCCGC CGTAGTCCGC GCGGAAATCA TCGACACCTC CGGCCTGCCG CTGGCCAGCG CCTCGCGCGA ACCCGCCGAA AGCCGCCTGC GGCCGCTCAG CGACTTCCTC TTCGGCCACA AGCGGGTCTA CGAGGACCCG TTGCATGTCG ACCATGCGCC GGGCGAGGCC CTCGGCGTAC TGCAGCTGGA AATCGACACC TTCGTGTTCG GCAACGACTT CCTCCGTCGC GCCGGCATCA CCCTGCTCTC CGGCTTCGTG CGCAGCCTGC TGCTGTCGCT GATCCTGCTG GTGCTCTTCT ACACCCTGCT GACCAAGCCC CTGGTCAGCC TGATCCAGGC CCTCAGCGGA CACGATCCAC GCTCGCCGGC ACGCATGCGC CTGCCCTGCC CCAAGGGCCA CGAACGCGAC GAGATCGGCG TGCTGGTGGA AGTCATCAAC CGCCAGCTCG GGCGCATCTC GGTAGAGATC GAACAGCGCA GGGAGGCGGA GAACCGCCTG ACCCAGTATC TGGAGGAGCT GGAAAGCATC GTCGCCGCCC GTACCGCCGA GCTGAAGGCC GCCAACGCGC GCCTGACGCT GTCCAACCAG GAACTCGAAG AAGCCCGCCA GACCGCCCTC GACATGGCCC AGGCCCGCGC CAGCTTCCTG GCCAACATGA GCCACGAGAT CCGCACGCCG CTGAACGGCC TGCTCGGCAT GCTCTCGCTG AGCCTCGACG GCCCGCTCAC CCCGGAACAG CGCCAACAGC TGTCGATCGC CCACGACTCC GGCAAGGTGC TGGTGGAATT GCTCAACGAC GTGCTCGACC TCTCCAAGTT CGAGGCCGGG CAACTGGTCC TGGAACAGAT CCCGTTCGAC CTGGGCGTCC TGGTGGAAGA CACCGCCAGC CTCCTCTCGC AGAACGCCGC GGCCGGCGTG GAGTTGACCT GCCTGGTCGA CCCCGCCCTG CCCGCCCAGG TTTCCGGCGA CCCGACGCGG ATTCGCCAGG TCGTCAGCAA CCTGCTGTCC AACGCGCTGA AGTTCACCCG CCTGGGGCGG GTCGACGTTC GCGTGGAAGC CACCGCCGAG GGTGTGCGCA TCAGTGTGCG CGACACCGGC ATCGGCATCG CCCAGGAGGC GCTGGATCGC ATCTTCCAAC CGTTCACCCA GGCCGACGCG GGTATCACCC GCCAATACGG CGGCACCGGC CTCGGCCTGG CCCTCACGCG CAAGCTGTGC GAGGCCATGC AGGGCGAACT GACGGTGGAG TCGACGGTCG GCCTGGGCAG CCTGTTCAGC GTCGGCCTGC CGCTGGCGCC GGTCAGCCCT CCGCTACAGG CGCTGCCGCT GCGCGGCCGG GTGATCGCGC AATGCTCGGC CAACAGCGGG CTGGCGCAGC TGCTGCAAAC CTGGCTGCCG CGCTGGGGCC TGGAGTACAA GCGTCTGGAG ACCGACGACA GCCTGCTCGG CCACTCGCTC GACGTACTGA TATCGGATTG CCCGGACTGC CTGATGGGAC TGCGTCCGAG CATCGGTACG CCGATCCTGC TGGTCACCGC CTACGGCAGT TTCCTCGAAC CGGAGCTGGC CCGCCGCCTG TCGCCGTTGC GCCAACTGGC CAGGCCGCTG AGTCGCAACC AGTTGTACCA GGCCCTGAAA CACGTGCTCG AACACACCGC CATAGCCCCG TCGAGCGCCT CGGACACCGC GGGAGAACAG CGCGACACCC GGGTCCTGCT GGTGGAGGAC AACCCGGTCA ACCAGTTGGT CGCCAAGGGC CTGCTGCACA AGCTCGGCTG CCAGGTATGG ATCGCCGAAC ACGGGCTGAA TGCCCTGAAG ATGCTGGAGG AGCATCCCAT CGACCTGGTC CTGATGGACT GCAACATGCC GGTGATGGAC GGCTACGAAG CGACCCGGCA GATCCGCGAC AGCGGACGCT GGGGCGGCCT GCCGATCATC GCGCTGACCG CCAACGCCCT GCCGGACGAG CGCGAACGTT GTCGTGCCGC CGGCATGGAC GACTACCTGG CCAAGCCCTT CCACCGCGAC GAACTGAAGG CCATCCTCGA CCGCTGGTGC CCGCTCACCG CGGGCGACTA G
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Protein sequence | MLGGRTSPRL IPAPMDIALT HRLSFKQASL TVLVAFILGT LLSLIQVGVD YASQDASINR EVRALLDVSH NPAARIAYNI DAELAQELVL GLLRSPAVVR AEIIDTSGLP LASASREPAE SRLRPLSDFL FGHKRVYEDP LHVDHAPGEA LGVLQLEIDT FVFGNDFLRR AGITLLSGFV RSLLLSLILL VLFYTLLTKP LVSLIQALSG HDPRSPARMR LPCPKGHERD EIGVLVEVIN RQLGRISVEI EQRREAENRL TQYLEELESI VAARTAELKA ANARLTLSNQ ELEEARQTAL DMAQARASFL ANMSHEIRTP LNGLLGMLSL SLDGPLTPEQ RQQLSIAHDS GKVLVELLND VLDLSKFEAG QLVLEQIPFD LGVLVEDTAS LLSQNAAAGV ELTCLVDPAL PAQVSGDPTR IRQVVSNLLS NALKFTRLGR VDVRVEATAE GVRISVRDTG IGIAQEALDR IFQPFTQADA GITRQYGGTG LGLALTRKLC EAMQGELTVE STVGLGSLFS VGLPLAPVSP PLQALPLRGR VIAQCSANSG LAQLLQTWLP RWGLEYKRLE TDDSLLGHSL DVLISDCPDC LMGLRPSIGT PILLVTAYGS FLEPELARRL SPLRQLARPL SRNQLYQALK HVLEHTAIAP SSASDTAGEQ RDTRVLLVED NPVNQLVAKG LLHKLGCQVW IAEHGLNALK MLEEHPIDLV LMDCNMPVMD GYEATRQIRD SGRWGGLPII ALTANALPDE RERCRAAGMD DYLAKPFHRD ELKAILDRWC PLTAGD
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