Gene PA14_27440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_27440 
Symbol 
ID4380882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2381976 
End bp2382941 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID639324762 
Productputative transcriptional regulator 
Protein accessionYP_790339 
Protein GI116050838 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.016223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.601013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCACTC AAGGGTGCTT ATACTTCCAC TCCATGCATC TTCCCGATAT GAATCTCCTG 
GTCGCCCTCA ACGTTCTTCT CGAAGAGGGC AGCGTGGTCG GAGCCGCGCG CCGCATGCAC
CTCAGCCCAC CGGCGATGAG CCGTACCCTG TCGCGGATCC GCGAGGCGGT AGGCGACCCG
ATCATGGTCC GCGCCGGCCG CAAGCTGGTG CCCACGCCCC GCGCCCTGGA ACTGCAAGAG
CAGGTCCGGC AACTGGTGGA CCAGGCCCGC GACCTGTTCA ACACCCGCGA GACCATCCAA
CTGGACAAGC TGGAGCGCTG CTTCACCCTG CGTTCCAACA ACACCCTGGT CGGCGGTCTG
GCCACCCGCA TACTGGAAAT CTTCAGCAAG GAAGCGCCAC GCTGTACCCT GCGCTTCGCC
CCGGAATCGG ACATAGACGA CGAAGCCCTG CGGCAGAACC GCATCGACCT CTACATCGGC
GCCTCGTCCT GGATGGAGCC CGAGGTCAAG ACCCAGCAAC TGCTCACCAC CCGCTTCGTC
GGCCTGGCCC GCCAGGGGCA TCCGATCTTC GACGACGACA TCACCCCGCA GCGCTTCGCC
GCCTTCCCCC ACATCAGCGT CTCGCGCCGC GGACTCCACC ACGGCCCGCT GGACCAAGCC
CTGGGAGAGC TGGGGGTGAC CCGCCAGGTC AAGCTGGTCT GCGCAACCTT CCACTCGGCG
ATCTTCGCCC TGCCCGGTTC CGACCTGCTG CTGCCGATCG CCGAGCACTC CCTGTGGCGG
GCCAACCGAC TGGGCCTGGG CCTGCGCCAG TTCGACATCC CGGTGCCATT GAAGACCGTG
ATGGTGGTCC AGGCCTGGCA TCCACGCTTC GACAACGATC CCGCGCACCG CTGGTTCCGG
CAAACGGTCA AGCGGCTTTG CGAGGAAGTG CAGAACGATC CCCATCCGCT GCTGGGCTCC
AACTGA
 
Protein sequence
MRTQGCLYFH SMHLPDMNLL VALNVLLEEG SVVGAARRMH LSPPAMSRTL SRIREAVGDP 
IMVRAGRKLV PTPRALELQE QVRQLVDQAR DLFNTRETIQ LDKLERCFTL RSNNTLVGGL
ATRILEIFSK EAPRCTLRFA PESDIDDEAL RQNRIDLYIG ASSWMEPEVK TQQLLTTRFV
GLARQGHPIF DDDITPQRFA AFPHISVSRR GLHHGPLDQA LGELGVTRQV KLVCATFHSA
IFALPGSDLL LPIAEHSLWR ANRLGLGLRQ FDIPVPLKTV MVVQAWHPRF DNDPAHRWFR
QTVKRLCEEV QNDPHPLLGS N