Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_27440 |
Symbol | |
ID | 4380882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2381976 |
End bp | 2382941 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639324762 |
Product | putative transcriptional regulator |
Protein accession | YP_790339 |
Protein GI | 116050838 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.016223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.601013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCACTC AAGGGTGCTT ATACTTCCAC TCCATGCATC TTCCCGATAT GAATCTCCTG GTCGCCCTCA ACGTTCTTCT CGAAGAGGGC AGCGTGGTCG GAGCCGCGCG CCGCATGCAC CTCAGCCCAC CGGCGATGAG CCGTACCCTG TCGCGGATCC GCGAGGCGGT AGGCGACCCG ATCATGGTCC GCGCCGGCCG CAAGCTGGTG CCCACGCCCC GCGCCCTGGA ACTGCAAGAG CAGGTCCGGC AACTGGTGGA CCAGGCCCGC GACCTGTTCA ACACCCGCGA GACCATCCAA CTGGACAAGC TGGAGCGCTG CTTCACCCTG CGTTCCAACA ACACCCTGGT CGGCGGTCTG GCCACCCGCA TACTGGAAAT CTTCAGCAAG GAAGCGCCAC GCTGTACCCT GCGCTTCGCC CCGGAATCGG ACATAGACGA CGAAGCCCTG CGGCAGAACC GCATCGACCT CTACATCGGC GCCTCGTCCT GGATGGAGCC CGAGGTCAAG ACCCAGCAAC TGCTCACCAC CCGCTTCGTC GGCCTGGCCC GCCAGGGGCA TCCGATCTTC GACGACGACA TCACCCCGCA GCGCTTCGCC GCCTTCCCCC ACATCAGCGT CTCGCGCCGC GGACTCCACC ACGGCCCGCT GGACCAAGCC CTGGGAGAGC TGGGGGTGAC CCGCCAGGTC AAGCTGGTCT GCGCAACCTT CCACTCGGCG ATCTTCGCCC TGCCCGGTTC CGACCTGCTG CTGCCGATCG CCGAGCACTC CCTGTGGCGG GCCAACCGAC TGGGCCTGGG CCTGCGCCAG TTCGACATCC CGGTGCCATT GAAGACCGTG ATGGTGGTCC AGGCCTGGCA TCCACGCTTC GACAACGATC CCGCGCACCG CTGGTTCCGG CAAACGGTCA AGCGGCTTTG CGAGGAAGTG CAGAACGATC CCCATCCGCT GCTGGGCTCC AACTGA
|
Protein sequence | MRTQGCLYFH SMHLPDMNLL VALNVLLEEG SVVGAARRMH LSPPAMSRTL SRIREAVGDP IMVRAGRKLV PTPRALELQE QVRQLVDQAR DLFNTRETIQ LDKLERCFTL RSNNTLVGGL ATRILEIFSK EAPRCTLRFA PESDIDDEAL RQNRIDLYIG ASSWMEPEVK TQQLLTTRFV GLARQGHPIF DDDITPQRFA AFPHISVSRR GLHHGPLDQA LGELGVTRQV KLVCATFHSA IFALPGSDLL LPIAEHSLWR ANRLGLGLRQ FDIPVPLKTV MVVQAWHPRF DNDPAHRWFR QTVKRLCEEV QNDPHPLLGS N
|
| |