| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_27330 |
|---|
| Symbol | |
|---|
| ID | 4380891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2370395 |
|---|
| End bp | 2371741 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639324753 |
|---|
| Product | putative phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_790330 |
|---|
| Protein GI | 116050847 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT CCTGGAGCCC CGAGAGCTGG AGGGCCAAGC CGATCCAGCA ACAACCCGAG
TACCCCGATG CCGCGCACCT GGCCAGGGTC GAGCAGACCC TCGCCGGATA CCCGCCGCTG
GTCTTCGCCG GCGAGGCTCG CGAGCTGCGC CGGCAGTTCG CCGAAGTCAC CGCCGGACGC
GCCTTCTTGC TCCAGGGCGG GGATTGCGCG GAAAGCTTCG CCGAATTTTC CGCGGCGAAG
ATCCGCGATA CCTTCAAGGT ACTGTTGCAG ATGGCGGTGG TAATGACCTT CGCCGCCGGC
TGCCCGGTAG TGAAGGTCGG GCGCATGGCC GGCCAGTTCG CCAAGCCGCG CTCCTCCGGC
GACGAAACGC AGAACGGCGT GACCCTGCCT GCCTATCGCG GCGACATAGT CAACGGCATC
GGCTTCGACG AGAAGAGCCG CGTGCCGGAC CCGGAGCGCC TGTTGCAGGC CTACCACCAG
TCCACCGCCA GCCTCAACCT GTTGCGCGCC TTCGCCCAGG GCGGCTTCGC CGACCTGCAC
CAGGTGCACC GCTGGAACCT CGACTTCATC GCCAACTCGG CGCTGGCCGA GCGCTACCAG
CAACTCGCCG ACCGCATCGA CGAGACCCTC GCCTTCATGC GCGCCTGCGG CCTGGACAGC
GCGCCGCAGC TCCGCGAAAC CAGCTTCTTC ACCGCCCACG AAGCGCTCCT GCTGAACTAC
GAGGAAGCCC TGACCCGCCG CGACAGCCTG ACCGGCGAGT GGTACGACTG CTCGGCGCAC
ATGCTCTGGA TCGGCGACCG CACCCGCCAG CTCGACGGCG CTCATGTCGA GATGCTGCGC
GGCGTAGGCA ATCCGATCGG GGTCAAGGTC GGACCGAGCA TGGACAGCGA GGAGCTGATC
CGCCTGATCG ATATTCTCAA CCCGGACAAC GATCCGGGCC GCCTCAACCT GATCGTGCGG
ATGGGTGCCG ACAAGGTCGG CGACCACCTG CCGCGCCTGA TCCAGGCCAT CCAGCGCGAG
GGCCGCCAGG TGCTGTGGAG TTCCGACCCG ATGCACGGCA ATACCATCAA GGCCTCCAGC
GGCTACAAGA CCCGCGACTT CGCCCGCGTG CTCGCCGAAG TCCGCCAGTT CTTCGAGGTG
CACCAGGCCG AAGGCAGCTA CGCCGGCGGC ATCCACATCG AGATGACCGG GCAGAACGTC
ACCGAATGCA TCGGCGGTTC GCGACCGATC ACCGAAGACG GCCTCAGCGA CCGCTACCAC
ACCCACTGCG ACCCGCGGCT GAACGCCGAC CAGTCGCTGG AGCTGGCCTT CCTGATCGCC
GAAACCCTGA AGCAGGTACG CCGCTGA
|
|---|
| Protein sequence | MSQSWSPESW RAKPIQQQPE YPDAAHLARV EQTLAGYPPL VFAGEARELR RQFAEVTAGR
AFLLQGGDCA ESFAEFSAAK IRDTFKVLLQ MAVVMTFAAG CPVVKVGRMA GQFAKPRSSG
DETQNGVTLP AYRGDIVNGI GFDEKSRVPD PERLLQAYHQ STASLNLLRA FAQGGFADLH
QVHRWNLDFI ANSALAERYQ QLADRIDETL AFMRACGLDS APQLRETSFF TAHEALLLNY
EEALTRRDSL TGEWYDCSAH MLWIGDRTRQ LDGAHVEMLR GVGNPIGVKV GPSMDSEELI
RLIDILNPDN DPGRLNLIVR MGADKVGDHL PRLIQAIQRE GRQVLWSSDP MHGNTIKASS
GYKTRDFARV LAEVRQFFEV HQAEGSYAGG IHIEMTGQNV TECIGGSRPI TEDGLSDRYH
THCDPRLNAD QSLELAFLIA ETLKQVRR
|
|---|
| |