| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_26890 |
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| Symbol | pyrF |
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| ID | 4380923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2339177 |
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| End bp | 2339875 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639324720 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_790298 |
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| Protein GI | 116050879 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.131013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGCCT GCCAGTCCCC CATCATCGTC GCCCTGGATT TCCCCACCCG TGAGGCCGCC
CTGGCGCTGG CCGATCAGCT GGACCCGAAA CTGTGCCGGG TGAAGGTCGG CAAGGAACTC
TTCACCAGTT GTGCCGCGGG TATAGTCGAG ACCTTGCGCG GCAAGGGCTT CGAGGTGTTC
CTCGACCTGA AATTCCATGA CATCCCGAAC ACCACGGCGA TGGCGGTGAA GGCCGCCGCC
GAGATGGGCG TGTGGATGGT CAACGTGCAC TGCTCCGGCG GCCTGCGCAT GATGGCCGCC
TGCCGCGAGA CGCTGGAGGC CTTCAGCGGA CCCAGGCCGT TGCTCATCGG CGTGACCGTG
CTGACCAGCA TGGAGCGCGA GGACCTGGCG GGCATCGGCC TCGACATCGA GCCCCAGGAG
CAGGTACTGC GCCTCGCCGC CCTGGCGCAG AAGGCCGGCA TGGACGGCCT GGTCTGCTCG
GCCCAGGAAG CGCCGGCGCT GAAGGCTGCC CATCCGGGCC TGCAACTGGT CACGCCGGGC
ATCCGCCCGG CCGGCAGCGC CCAGGACGAC CAGCGGCGTA TCCTCACCCC GCGCCAGGCC
CTGGACGCCG GCTCCGACTA CCTGGTGATC GGCCGGCCGA TCAGCCAGGC CGCCGACCCG
GCCAAGGCGC TGGCGGCGAT CGTCGCCGAA CTGGGCTGA
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| Protein sequence | MSACQSPIIV ALDFPTREAA LALADQLDPK LCRVKVGKEL FTSCAAGIVE TLRGKGFEVF
LDLKFHDIPN TTAMAVKAAA EMGVWMVNVH CSGGLRMMAA CRETLEAFSG PRPLLIGVTV
LTSMEREDLA GIGLDIEPQE QVLRLAALAQ KAGMDGLVCS AQEAPALKAA HPGLQLVTPG
IRPAGSAQDD QRRILTPRQA LDAGSDYLVI GRPISQAADP AKALAAIVAE LG
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