| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_26730 |
|---|
| Symbol | |
|---|
| ID | 4380934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2328770 |
|---|
| End bp | 2329648 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324709 |
|---|
| Product | putative short-chain dehydrogenase |
|---|
| Protein accession | YP_790287 |
|---|
| Protein GI | 116050890 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG ACTCGATCTT CCGACCTGGC CTGTTCGACG GCCAGACCAT CATCGTCACC
GGCGGCGGCA GTGGCATCGG CCGCTGCACC GCCCATGAGC TGGCGGCCCT CGGCGCCCAC
GTGGTGCTGG TCGGACGCAA GGCGGAAAAG CTGGAGAAGA CCGCCGGCGA GATCGTCGAG
GACGGCGGCA GCGTCAGCTG GCACGCCTGC GACATCCGCG AGGAGGAAGC GGTGAAGACG
CTGGTGGCGA ATATCCTGGC CGAACGCGGG ACCATCCATC ACCTGGTCAA CAACGCCGGC
GGCCAGTATC CCTCGCCCCT CGCCTCGATC AGCCAGAAGG GCTTCGAGAC CGTGCTCCGC
ACCAACCTGG TCGGCGGCTT CCTGGTCGCC CGCGAAGTGT TCAACCAGTC GATGAGCAAG
ACCGGCGGCA GCATCGTCAA CATGCTCGCC GACATGTGGG GCGGCATGCC CGGCATGGGT
CACTCCGGCG CCGCACGCTC CGGCATGGAG AATTTCACCA GGACCGCCGC CGTCGAGTGG
GGCCATGCCG GCGTGCGGGT CAACGCGGTG GCGCCGGGCT GGATCGCGTC CAGCGGCATG
GATACCTACG AAGGCGCGTT CAAGGCGGTG ATCCCGACCC TGCGCGAGCA CGTGCCGCTC
AAGCGCATCG GCAGCGAGTC GGAAGTCGCC GCCGCCATCG TCTTCCTGCT CTCCCCCGGC
GCCGCCTTCG TCAGCGGCAA CACGATCCGC ATCGACGGCG CCGCCAGCCA GGGCAGCCGC
GCCTTCCCGC TATTCAAGGG CAAGCCGGGA CAGAGCCGCG CGTACAACGG CTTCCACCGC
GCCTACCTGC CCGACGTGCT GAAGGACCAG GAGGACTGA
|
|---|
| Protein sequence | MSYDSIFRPG LFDGQTIIVT GGGSGIGRCT AHELAALGAH VVLVGRKAEK LEKTAGEIVE
DGGSVSWHAC DIREEEAVKT LVANILAERG TIHHLVNNAG GQYPSPLASI SQKGFETVLR
TNLVGGFLVA REVFNQSMSK TGGSIVNMLA DMWGGMPGMG HSGAARSGME NFTRTAAVEW
GHAGVRVNAV APGWIASSGM DTYEGAFKAV IPTLREHVPL KRIGSESEVA AAIVFLLSPG
AAFVSGNTIR IDGAASQGSR AFPLFKGKPG QSRAYNGFHR AYLPDVLKDQ ED
|
|---|
| |