Gene PA14_26540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_26540 
Symbol 
ID4380949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2312746 
End bp2313594 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID639324694 
Producthypothetical protein 
Protein accessionYP_790272 
Protein GI116050905 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.171066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTC GCTGTTCCCC GTGCCGCCTG GCCGGCATCC TGCTGGCGGC GCTGTTCGTT 
CCGGGGCTGG CCGCGGCGGC CGGCTCCTGC GAGCGCCTGG TGGCCACCGG CAACCCGGAG
TACCCACCCT ACCTGTGGCG CGACCCGCAG GATCCGAAGC GCCTGATCGG AGCCAATGCC
GACCTGTTGC AGCGCCTGGG CAAGGAGCTC GGCGTGCGCA TCGACGTGCT CTACAGCGGC
TCCTGGGAGA AGGCCCAGGA AGAGGTGACC AGCGGTCGCG CCGACCTGCT CGCCGGGGCC
TACCTGACCC TGGCACGGCT CGGCAGCATG GACTACGTGC ATCCGCCGTT CCTGATGACC
AGCGGGGTGG TCTGGGTGAA CAAGGACGCC GCGTTCCCGT TCATCGGCCG CGACGACCTG
ATCGGGCACA AGGGCAGCGT GCTGGCCGGC AGCAGCCTGG GCGAGGAGTT CGACCGCTTC
GCCAAGGCCA GTCTCGACCT GAAGCCGGTG CCGAGCCTGA CCCAGGGCTT GCAGGACCTG
ATGCTCAAAC GCAGCGAGTT CCTCCTCTAC CAGGCGCTGC CCGGGCAGGC CCAGGTCGAG
GCGCTGGGCA TGGCCGACGA CCTGGAGGCG CTGGAACCGG TGCTGAGCAG CGAGGGGCTG
TACCTGACGC TGTCGCACAA CTCCGCTTGC AACGATCCGT GGCTGCGCGG ACAACTGGCG
AAAAAGATGA CAGAATTGTC GGCTGCCGGC GTTCCCGTAA CGCTCTTGCA GGACAATCTC
GAACGCTGGA AAGCCCAGCA ATTGCCGGCT TCCGGCGCCA GTTCGACTAC GCAGGAAAGT
GACTTGTGA
 
Protein sequence
MSFRCSPCRL AGILLAALFV PGLAAAAGSC ERLVATGNPE YPPYLWRDPQ DPKRLIGANA 
DLLQRLGKEL GVRIDVLYSG SWEKAQEEVT SGRADLLAGA YLTLARLGSM DYVHPPFLMT
SGVVWVNKDA AFPFIGRDDL IGHKGSVLAG SSLGEEFDRF AKASLDLKPV PSLTQGLQDL
MLKRSEFLLY QALPGQAQVE ALGMADDLEA LEPVLSSEGL YLTLSHNSAC NDPWLRGQLA
KKMTELSAAG VPVTLLQDNL ERWKAQQLPA SGASSTTQES DL