Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_26330 |
Symbol | |
ID | 4380963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2296065 |
End bp | 2296901 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639324679 |
Product | AraC family transcriptional regulator |
Protein accession | YP_790257 |
Protein GI | 116050919 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.643276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGCC GAGACTGGAT CGACCTGGCC CGCGACGCCG AGACCGGGAT CGAGACCCTG CGCGCCCATT TCGAGGGCCA CGCCTACGAT CCGCACTGGC ACGACAGCTA CCTGATCGGC TACACCGAGA TCGGCGTGCA GCAATTCAAC TGCCGCCGAC GCCGACACGA CAGCACCGCC GGCCAGGTAT TCCTGGTCGA ACCGGGGGAG ATCCACGACG GTCGCGCGCC GATCGCCGGC GGCTTCACCT ACTCGATGCT GTACCTGCAG CCGGACTGGC TGCGGCGCGA ACTGCGGGCG ACCTTCGACG ATGCGCCCAG CGACCGCGAC CCCGGCTTCC ACGCCAACCT CACCGAAGAC CCGCGCCTGA CCCTGGCCAT CGCCCAGGCC TTCCGCGTCC TGCATGGCCG CGAGCTGCGA CTGCTGCGGC AGACCGCCCT GGAGCTGGTG CTGGAGCGGC TGCGCGTGCA CCTCGGCTGG CGCGAGGCGA AGCCATTCGA TCCACGCCTG CCGCTGGTGG CGCAGAAAGC CCGCGACTAC CTGCATGCGC ACTTCTACCA GGACATCGGC CTGGACGAGC TGGCCAGCGC CTGCGGCACC GACCGCTTCC GCCTGAACCG TGCATTCAAG GCCGCCTACG GCTTGCCACC CTACGCCTAC CTGGTCCAGT TGCGGCTGGC CAAGGCGCGG CAGATGCTCG CTGTCGGCGG GCAACCGGCG GACCTCGCCA GCGCCCTCGG CTTCGCCGAC CAGAGCCATC TCGGCCGCTG GTTCCGGCGC GCCTACGGGA TGACTCCGGC GGCCTACCGC AGGCAGTGCA CCCAGCTTCC AGACTGA
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Protein sequence | MGSRDWIDLA RDAETGIETL RAHFEGHAYD PHWHDSYLIG YTEIGVQQFN CRRRRHDSTA GQVFLVEPGE IHDGRAPIAG GFTYSMLYLQ PDWLRRELRA TFDDAPSDRD PGFHANLTED PRLTLAIAQA FRVLHGRELR LLRQTALELV LERLRVHLGW REAKPFDPRL PLVAQKARDY LHAHFYQDIG LDELASACGT DRFRLNRAFK AAYGLPPYAY LVQLRLAKAR QMLAVGGQPA DLASALGFAD QSHLGRWFRR AYGMTPAAYR RQCTQLPD
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