Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_26220 |
Symbol | hisM |
ID | 4380971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2288477 |
End bp | 2289190 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324671 |
Product | histidine ABC transporter, inner membrane permease |
Protein accession | YP_790249 |
Protein GI | 116050927 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0102562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.637983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGG TACTCGACGA ATACTGGCAG GCCTACCTGT GGACCGACGG CCTGCAACTG ACCGGACTGG CGATGACCCT GTGGCTGCTG ATCCTCGCCG TGGCGCTTGG CTTCCTGCTG GCCATCCCGC TGGCGGTGGC GCGAACCTGC GGCAACCCGC TGCTGCGCTA CCCGGTCTGG CTCTACACCT ACGTGTTCCG CGGCACCCCG CTGTACATCC AGTTGCTGTT CTTCTACACC GGCGTCTACA GCCTGAATGC CATACGCGCC CAGGACTTTC TCAACGCGTT CTTCCGCGAC GGCTTCAACT GCACGGTACT GGCCTTCGTC CTCAACACCT GCGCCTACAT GACGGAAATC TTCGCCGGCG CGATCAGGAA CACGCCCCAC GGCGAAGTGG AAGCGGCGCG CGCCTACGGC ATGGGCGGCT TCACCCTCTA CCGGCGCATC GTCCTGCCCT CGGCGCTGCG CCGGGCACTG CCGTACTTCA GCAACGAAGT GATCCTGATG CTGCATTCCA CCTCGGTGGC GTTCACCGCC ACCGTGCCGG ACCTGCTCAA GGTGGCCCGC GACGTCAATT CCGCCACCTA TGCGCCGTTC CTGTCCTTCG GCATCGCCGG CGCGCTCTAC GCCGGCACCG CCTTCCTGCT GATCTGGCTG TTCCGCCGCG GCGAGCTGCG CTGGCTGGCC TACCTCAGAC CGCAAACCCA CTGA
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Protein sequence | MNAVLDEYWQ AYLWTDGLQL TGLAMTLWLL ILAVALGFLL AIPLAVARTC GNPLLRYPVW LYTYVFRGTP LYIQLLFFYT GVYSLNAIRA QDFLNAFFRD GFNCTVLAFV LNTCAYMTEI FAGAIRNTPH GEVEAARAYG MGGFTLYRRI VLPSALRRAL PYFSNEVILM LHSTSVAFTA TVPDLLKVAR DVNSATYAPF LSFGIAGALY AGTAFLLIWL FRRGELRWLA YLRPQTH
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