Gene PA14_26220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_26220 
SymbolhisM 
ID4380971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2288477 
End bp2289190 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID639324671 
Producthistidine ABC transporter, inner membrane permease 
Protein accessionYP_790249 
Protein GI116050927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0102562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.637983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG TACTCGACGA ATACTGGCAG GCCTACCTGT GGACCGACGG CCTGCAACTG 
ACCGGACTGG CGATGACCCT GTGGCTGCTG ATCCTCGCCG TGGCGCTTGG CTTCCTGCTG
GCCATCCCGC TGGCGGTGGC GCGAACCTGC GGCAACCCGC TGCTGCGCTA CCCGGTCTGG
CTCTACACCT ACGTGTTCCG CGGCACCCCG CTGTACATCC AGTTGCTGTT CTTCTACACC
GGCGTCTACA GCCTGAATGC CATACGCGCC CAGGACTTTC TCAACGCGTT CTTCCGCGAC
GGCTTCAACT GCACGGTACT GGCCTTCGTC CTCAACACCT GCGCCTACAT GACGGAAATC
TTCGCCGGCG CGATCAGGAA CACGCCCCAC GGCGAAGTGG AAGCGGCGCG CGCCTACGGC
ATGGGCGGCT TCACCCTCTA CCGGCGCATC GTCCTGCCCT CGGCGCTGCG CCGGGCACTG
CCGTACTTCA GCAACGAAGT GATCCTGATG CTGCATTCCA CCTCGGTGGC GTTCACCGCC
ACCGTGCCGG ACCTGCTCAA GGTGGCCCGC GACGTCAATT CCGCCACCTA TGCGCCGTTC
CTGTCCTTCG GCATCGCCGG CGCGCTCTAC GCCGGCACCG CCTTCCTGCT GATCTGGCTG
TTCCGCCGCG GCGAGCTGCG CTGGCTGGCC TACCTCAGAC CGCAAACCCA CTGA
 
Protein sequence
MNAVLDEYWQ AYLWTDGLQL TGLAMTLWLL ILAVALGFLL AIPLAVARTC GNPLLRYPVW 
LYTYVFRGTP LYIQLLFFYT GVYSLNAIRA QDFLNAFFRD GFNCTVLAFV LNTCAYMTEI
FAGAIRNTPH GEVEAARAYG MGGFTLYRRI VLPSALRRAL PYFSNEVILM LHSTSVAFTA
TVPDLLKVAR DVNSATYAPF LSFGIAGALY AGTAFLLIWL FRRGELRWLA YLRPQTH