Gene PA14_26160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_26160 
Symbol 
ID4380975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2283740 
End bp2284354 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID639324666 
Producthypothetical protein 
Protein accessionYP_790244 
Protein GI116050931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.519724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.19854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGT TGCTAGCTTT CCTGACCATC ACCGTGCTTG CGGTGATCAG CCCCGGCGCC 
GATTTCGCCA TGGTCTCGCG CAACAGCCTG CTGTATTCCC GCCGCGCCGG CCTGCTCACC
GCGCTGGGCA TCGGCGCGGG GGTGACGGTA CATGTCGGCT ACAGCATCCT CGGCGTCGGC
GTGCTGGTGC GCGAGTCGCT GGCGCTGTTC ACCGCGCTGA AGCTGGCGGG CGCCGCCTAC
CTGGTGTTCC TCGGCCTGCG CATGCTGCTG GCGCGAGAGG ACACGGTGGC GGAGGAGGCG
GCGGGCGGCG CCGGGGTTTC GTCCTGGGCG ATGTTGCGCA GCGGCTTCCT GACCAATGCG
CTCAATCCGA AGACCTGCCT GTTCGTGGTC AGCCTGTTCA TGCAGGTGAT CGATCCGCAT
ACCGCGTTGC CGGCGCAACT AGGCTACGGG GCCTTCATCG CGCTCGCCCA CGTGGCCTGG
TTCGGCCTGG TCGCCTGCTT TCTCTCGAGC CCGGCGGTGC GCGGCCGGCT CCTGCGTTTC
CGCCGGCGCA TCGACCAGTT CTTTGGCGCC CTGCTGGTCG GTTTCGGCGT CCTGCTGGGG
GCGAAAAGCC CATGA
 
Protein sequence
MTELLAFLTI TVLAVISPGA DFAMVSRNSL LYSRRAGLLT ALGIGAGVTV HVGYSILGVG 
VLVRESLALF TALKLAGAAY LVFLGLRMLL AREDTVAEEA AGGAGVSSWA MLRSGFLTNA
LNPKTCLFVV SLFMQVIDPH TALPAQLGYG AFIALAHVAW FGLVACFLSS PAVRGRLLRF
RRRIDQFFGA LLVGFGVLLG AKSP