| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_25980 |
|---|
| Symbol | aroF |
|---|
| ID | 4380989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2268777 |
|---|
| End bp | 2269871 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639324652 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_790230 |
|---|
| Protein GI | 116050945 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0140841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.390824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAT CCGTATCCGC ACTGACCGCC CTTTCGCCGA ACGCCCAGGC CGTCGCCCTG
CCCAGCGCCA CCGCCCGTAC CGCCCTGGAA CGCCTGCCCA GCCCGCTCGA ACTCAAGGCT
CGCCAGCCGT TGCCGCTGGA GCTGGCCAGC CAGGTCGCCG CCAGCCGCGA CGCCATCCGC
GCCATCCTCG ACGGCGACGA CCCACGCCTG CTGGTGGTAG TCGGTCCCTG TTCGATCCAC
GATCCCCGCT CCGCCCTCGA ATACGCCGAA CGCCTCGCCG CGCTGAGCGA CGAACTCGAC
GGCCAGTTGC TCCTGGTGAT GCGCGCCTAC GTGGAAAAGC CACGCACCAC GGTGGGCTGG
AAGGGCCTCG CCTACGACCC GCACCTGGAT GGCAGCGACG ACATGGCCGC CGGCCTGGCG
CTATCCCGGC AACTGATGCT GGACATGCTG CGCCTCGGCC TGCCGCTGGC CACCGAACTC
CTGCAACCGC TGGCCGCCGG CTACTTCGAC GACCTGCTGA GCTGGGCGGC GATCGGCGCG
CGCACCAGCG AATCGCAGAT CCACCGCGAG CTGGTCAGCG GCCTCGGCCT GCCGGTGGGC
TTCAAGAACG GCACCGACGG CGGCGTCGGC ATCGCCTGCG ACGCGATCCG TTCGGCGGCC
CACGGCCACC GCCATTTCGG CCTCGACCCG CACGGTCACC CGGCGCTGAT CGAGACCCGC
GGCAATCCGG ACACCCATGT GGTGCTGCGC GGCGGCCGCC ACGGTTCGAA CTACGGTCCC
GAGCAGGTGC AGGCCGTACG CCAGGCCCTG GAAAGCCAGG GCATCGCCAC GCGGATGATG
GTCGATTGCA GTCACGCCAA CAGCGGCAAG AACCCGCTGA ACCAGCCCGG CGTCCTCGCC
AGCGTGCTGG ACCAGCGCCT GGTCGGCGCC AGCGACCTGG TCGGGGTAAT GCTGGAAAGC
CACCTGTTCG ACGGTTGCCA GGCGCTCGGC GGCGAACTGC GCTACGGCGT CTCGATCACC
GACGGCTGCC TCGGCTGGGA AGGCACCGAG CGGATTCTCC GCGACGCCGC CCGGCGGCTC
GCCGAGGGGC GCTGA
|
|---|
| Protein sequence | MNSSVSALTA LSPNAQAVAL PSATARTALE RLPSPLELKA RQPLPLELAS QVAASRDAIR
AILDGDDPRL LVVVGPCSIH DPRSALEYAE RLAALSDELD GQLLLVMRAY VEKPRTTVGW
KGLAYDPHLD GSDDMAAGLA LSRQLMLDML RLGLPLATEL LQPLAAGYFD DLLSWAAIGA
RTSESQIHRE LVSGLGLPVG FKNGTDGGVG IACDAIRSAA HGHRHFGLDP HGHPALIETR
GNPDTHVVLR GGRHGSNYGP EQVQAVRQAL ESQGIATRMM VDCSHANSGK NPLNQPGVLA
SVLDQRLVGA SDLVGVMLES HLFDGCQALG GELRYGVSIT DGCLGWEGTE RILRDAARRL
AEGR
|
|---|
| |