Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_25920 |
Symbol | cobM |
ID | 4380994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2261099 |
End bp | 2261851 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324647 |
Product | precorrin-3 methylase |
Protein accession | YP_790225 |
Protein GI | 116050950 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2875] Precorrin-4 methylase |
TIGRFAM ID | [TIGR01465] precorrin-4 C11-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0297541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.071417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTCT ATTTCATCGG CGCCGGTCCC GGCGACCCTG ACCTGATCAC CGTCAAGGGG CAGCGCCTGA TCCGCCAGTG CCCGGTGATC CTCTACGCCG GCTCGCTGGT TCCGCAAGCG CTGCTCGAGG GGCACCAGGC CGGCCAGGTG GTGAACACCG CCGAGCTGGA CCTCGAACAG ATCGTCGAGC TACTCGCGCA AGCCCATCGC CGCGGCCTCG ACGTAGCCCG CGTGCATTCC GGCGATCCCT CCCTGTACGG CGCCATCGGC GAGCAGATCC GCCACCTGCG CGAACTCGGC ATCCCCTATG AGATCGTCCC CGGAGTCACC GCCACCGCCG CCTGCGCCGC CCTGCTCGGC TGCGAGCTGA CCCTACCCGA AGTGTCCCAG ACGCTGATCC TGACCCGCTA CGCCGCACGC ACGAAGATGC CGGAAGGCGA GAGCCTGGGC GACCTGGCGC GGCACCGGGC GACCCTGGCG ATCCACCTGG GCGTCGCCCA CCTGGCGAAG ATCGTCGAGG AACTGCTGCC GCACTACGGC GCCGACTGCC CGGTCGCGGT GATCCACCGG GCCAGTTGGC CCGACCAGGA ACAGGTTCGC GGCACCCTCG GCGACATCCT GCCCAAGGTC GCCGCCAGGA ATTTCCGCCG CACCGCGCTG ATCCTGGTCG GCGAGGTGCT GGCCGCCGAA GGCTTCGCCG ACTCTTCGCT GTACCGCGCC GAGCATCGAC ATCTCTATCG ACCCGGCGAA TGA
|
Protein sequence | MTVYFIGAGP GDPDLITVKG QRLIRQCPVI LYAGSLVPQA LLEGHQAGQV VNTAELDLEQ IVELLAQAHR RGLDVARVHS GDPSLYGAIG EQIRHLRELG IPYEIVPGVT ATAACAALLG CELTLPEVSQ TLILTRYAAR TKMPEGESLG DLARHRATLA IHLGVAHLAK IVEELLPHYG ADCPVAVIHR ASWPDQEQVR GTLGDILPKV AARNFRRTAL ILVGEVLAAE GFADSSLYRA EHRHLYRPGE
|
| |