| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_25620 |
|---|
| Symbol | |
|---|
| ID | 4380997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2240409 |
|---|
| End bp | 2240945 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639324624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790202 |
|---|
| Protein GI | 116050973 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.00500507 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATG GGCCGATTCC ACCTCATATC GATCCGCGCA AGTTGGTCGA CCGCGGCGCC
ACCCTCGAGG GTGTGTACGC GCTCGCCGAT ATGCCGCGTG TATGCGAGCA ACTGACCAGC
GATGCCGGTG AGGTGCGCGT GAAGGTTTCC TTCGAGCGCG ACCACCAGAA GCTGGCGGTC
ATGCATATGC AGCTCGATAC CGAGGTGAGC ATGGTATGCC AACGCTGCCT GGATGCGGCG
GCCATTCCCG TGCATGGCGA ATATACCTAC GCCATTCTTC GGGAAGGTCA GTCCGCCGAC
GGTCTGCCGA AGGGGTACGA TGCGCTGGAA GTGGGGGAGG AACCCCTGGA CCTGCTGGCG
CTGGTCGAGG ACGAGCTGTT GCTCGCCTTA CCCATCGTTC CGGCCCATGA CCCCGAAGTA
TGTCAGCACC CGGCTGGATT CGTCGTCGAA GACGAGCCGG AGTCGAGCGA AGTCGAGGAC
AAGCGTCCTA ATCCGTTCAG CGTACTGGCA CAGTTGAAGC GTGACCCAAA CGTTTAG
|
|---|
| Protein sequence | MLNGPIPPHI DPRKLVDRGA TLEGVYALAD MPRVCEQLTS DAGEVRVKVS FERDHQKLAV
MHMQLDTEVS MVCQRCLDAA AIPVHGEYTY AILREGQSAD GLPKGYDALE VGEEPLDLLA
LVEDELLLAL PIVPAHDPEV CQHPAGFVVE DEPESSEVED KRPNPFSVLA QLKRDPNV
|
|---|
| |