| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_25330 |
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| Symbol | nqrD |
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| ID | 4381023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2215172 |
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| End bp | 2215846 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639324598 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_790176 |
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| Protein GI | 116050999 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGGCTG CTCAACCCAC GATCCGCGAA GTCCTGTTCA ATCCGGTCTT CCAGAACAAT
CCGATCGGCC TGCAGATCCT CGGGATCTGC TCGGCGCTGG CGGTAACCTC GAACCTGAAG
ACCGCTACCG TCATGGCCAT CGCCCTGACC CTGGTGACCG GCTTCTCCAA CCTGTTCATC
TCGATGATCC GCCGGCAGAT TCCCAGCTCG ATCCGGATGA TCGTGCAGAT GGTGATCATC
GCCTCGCTGG TGATCGTCGT CGACCAGGTG CTCAAGGCCT ATGCCTATAG CCTGAGCAAG
CAGCTCTCGG TGTTCGTCGG GCTGATCATC ACCAACTGCA TCGTGATGGG CCGCGCCGAA
GCCTTCGCCA TGGCCAACCC GCCGCTCGTG TCGTTCTTCG ACGGCATCGG CAACGGTCTC
GGCTACAGCG CCATGCTGCT GGTGCTGGGC TTCGTCCGCG AGCTGTTCGG CGCCGGCAAG
CTTTACGGCA TCAGCGTGTT GCCGACGGTC AACGATGGCG GCTGGTACCA GCCGAACGGC
CTGCTCCTGC TGCCGCCTTC GGCGTTCTTC CTGATCGGCC TGATCATCTG GGCCCTGCGG
ACCTGGAAGA AAGACCAGGT CGAGGCCCCG ACCTACAAGA TGGCCCCGCA GGTATCCAGC
AAGGAGGCTT ACTGA
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| Protein sequence | MMAAQPTIRE VLFNPVFQNN PIGLQILGIC SALAVTSNLK TATVMAIALT LVTGFSNLFI
SMIRRQIPSS IRMIVQMVII ASLVIVVDQV LKAYAYSLSK QLSVFVGLII TNCIVMGRAE
AFAMANPPLV SFFDGIGNGL GYSAMLLVLG FVRELFGAGK LYGISVLPTV NDGGWYQPNG
LLLLPPSAFF LIGLIIWALR TWKKDQVEAP TYKMAPQVSS KEAY
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