Gene PA14_25160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25160 
SymbollexA 
ID4381032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2200840 
End bp2201454 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID639324587 
ProductLexA repressor 
Protein accessionYP_790165 
Protein GI116051008 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGC TGACGCCCCG CCAAGCCGAG ATCCTCTCCT TCATCAAGCG CTGCCTGGAA 
GACCACGGCT TTCCGCCGAC CCGGGCGGAA ATCGCCCAGG AACTCGGCTT CAAGTCGCCG
AACGCCGCCG AGGAGCACCT CAAGGCGCTG GCACGCAAGG GCGCCATCGA AATGACTCCG
GGCGCCTCTC GCGGCATCCG CATTCCCGGC TTCGAACCGC ATGCCGCCAA CGACGATGAG
GGCCTGCCGG TGATCGGACG GGTCGCCGCC GGCGCACCGA TCCTCGCCGA ACAGAACATC
GAGGAATCCT GCCGGATCAA TCCCGCCTTC TTCAATCCTC GCGCCGACTA CCTGTTGCGC
GTGCGCGGCA TGAGCATGAA GGACATCGGC ATTCTCGACG GCGACCTGCT GGCCGTCCAC
GTCACCCGCG AAGCGCGCAA CGGCCAGGTG GTGGTCGCGC GGATCGGCGA GGAGGTCACG
GTGAAACGCT TCAAGCGCGA AGGCAGCAAG GTCTGGCTGC TGGCGGAAAA CCCTGAGTTC
GCTCCGATCG AAGTCGATCT GAAGGAGCAG GAACTGATCA TCGAAGGCTT GAGCGTCGGC
GTGATCCGAC GCTGA
 
Protein sequence
MQKLTPRQAE ILSFIKRCLE DHGFPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP 
GASRGIRIPG FEPHAANDDE GLPVIGRVAA GAPILAEQNI EESCRINPAF FNPRADYLLR
VRGMSMKDIG ILDGDLLAVH VTREARNGQV VVARIGEEVT VKRFKREGSK VWLLAENPEF
APIEVDLKEQ ELIIEGLSVG VIRR