| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_25000 |
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| Symbol | |
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| ID | 4384439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2185465 |
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| End bp | 2187393 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639324574 |
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| Product | putative soluble lytic transglycosylase |
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| Protein accession | YP_790152 |
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| Protein GI | 116051021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.805924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGTC GCCTGTTCAC TCTCGTTTCC TGTCTTTTGC TCAGTATTTC CTCCGTCGAC
GCGGCCCACG CCGCTTCCCT GACCGAACAA CGCCGTCTCT ACGACCAGGC CAAGGCCGCC
CTGGCCAAGG GCAACAGCGC GCCCTACATG GCCTCGCGCA GCGCCCTGCG CGATTACCCG
CTGGAACCCT ACCTGGCCTA CGACGAACTG ACCCATCGGC TGAAGTCCGC CAGCAACGAG
GAGGTCGAGC GCTTCCTCAC CGAACACGGC GACCTGCCGC AGATCGGCTG GCTGAAACTG
CGCTGGCTGC GCCTGCTGGC CGACCGCGGC GACTGGAAGA CCTTCGTCAA CTACTACGAT
CCGAAGCTGA ACTTCACCGA ACTCGACTGC CTGTATGGCC AGTACCAGCT GGGCCACGGC
CAGAAGGCCG AAGGCTACGC CACCAGCGAA CGCCTGTGGC TGGTCGGCAA GTCGCAGCCG
GCTGCCTGCG ACACCCTGTT CGGCCTCTGG CAGGGCGAAG GCCAGCTCAC CGAGGAAAAG
GTCTGGAAAC GCCTCAAGCT GGCCGCCGAA GCGCGCAACT ACAGCCTCGC CTCGCACCTC
GCGCAGCGCC TGCCGACCCT CGGCAACCAG GGCGCGCTGA TGGTCAGCGT GGCGCAGAAC
CCCGCCCAGC TGAGCCAGAC CGGCCGCTTC AGCCAGCGCG ACCATGCCAC CGCCGACGTG
GTCGGTCTCG GCCTGCGCCG CCTGGCGCGG CAGGACCCGG AAAAGGCCCT GAGCCTGCTC
GACTACTACA GCTCGGCGCT ACCCTTCTCC AGCGACGAGA AGGTCGCCAT CGCCCGCGAG
ATCGGTCTCA GCCTGGCCAA GCGATTCGAT CCGCGTGCAC TGCCGCTGAT GACCCAGTAC
GATCCCGGCC TGCGCGACAA CACCGTCACC GAATGGCGCA CCCGCCTGCT GCTGCGCCTG
GGCCGCTGGG ACGAAGCCTA TGCGCTGACC CGCAAGCTGC CCCAGGATCT CGCCGCCACC
AGCCGCTGGC GCTATTGGCA GGCACGCAGC CTGCAACTGG CACAGCCGAA CAGCAAGGAG
CCGATCGCGC TGTACCAGAA GCTCGCCGGC GAGCGCGACT TCTACGGTTT CCTCGCCGCC
GACCGCCTGA GCGTGCCGTA CAAGCTCGGC AACCGCCCTG CGCACATCGA CCCGCGCGTC
CTGCAACGCG TACGCAACGC CGCCAGCACG CGCCGGGCCA TGGAGTTCTT CAACCGTGGC
GAAGTGATCA ACGCCCGCCG CGAGTGGTAC CACGCCGCGC GCCTGTTCGA TCACGACGAG
CTGATCGCCC AGGCCAGGCT GGCCTACGAC ATGCAGTGGT ATTTCCCGGC GATCCGCTCG
ATCAGCCAGG CGCAGTACTG GGACGACCTG GACATCCGCT TCCCGATGGC GCACCGCGCC
ACCCTGGTGC GCGAAGCGAA GAACCGCGGC CTGCACTCCA GCTGGATCTT CGCCATCACC
CGGCAGGAAA GCGCGTTCAT GTCCGATGCC CGTTCCGGAG TCGGCGCCAC CGGACTGATG
CAGCTGATGC CCGGCACCGC CAAGGAGACC TCGCGCAAGT TCGGCATCCC GCTGGCCTCG
ACCCAGCAAC TGATCGTGCC CGACGTCAAC ATCCGCCTCG GCGCCGCCTA CCTGAGCCAG
GTGCATGGAC AGTTCAACGG CAACCGGGTA CTCGCCTCGG CCGCCTACAA CGCCGGTCCG
GGCCGCGTCC GCCAGTGGCT GAAAGATACC CGCCACCTGG CCTTCGACGT GTGGATCGAG
ACCATTCCGT TCGACGAGAC TCGCCAGTAC GTGCAGAACG TGCTGTCCTA TGCGGTGATC
TACGGGCAGA AGCTCAATGC GCCGCAGCCC ATCGTCGACT GGCACGAACG CTACTTCGAC
GATTTCTGA
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| Protein sequence | MRGRLFTLVS CLLLSISSVD AAHAASLTEQ RRLYDQAKAA LAKGNSAPYM ASRSALRDYP
LEPYLAYDEL THRLKSASNE EVERFLTEHG DLPQIGWLKL RWLRLLADRG DWKTFVNYYD
PKLNFTELDC LYGQYQLGHG QKAEGYATSE RLWLVGKSQP AACDTLFGLW QGEGQLTEEK
VWKRLKLAAE ARNYSLASHL AQRLPTLGNQ GALMVSVAQN PAQLSQTGRF SQRDHATADV
VGLGLRRLAR QDPEKALSLL DYYSSALPFS SDEKVAIARE IGLSLAKRFD PRALPLMTQY
DPGLRDNTVT EWRTRLLLRL GRWDEAYALT RKLPQDLAAT SRWRYWQARS LQLAQPNSKE
PIALYQKLAG ERDFYGFLAA DRLSVPYKLG NRPAHIDPRV LQRVRNAAST RRAMEFFNRG
EVINARREWY HAARLFDHDE LIAQARLAYD MQWYFPAIRS ISQAQYWDDL DIRFPMAHRA
TLVREAKNRG LHSSWIFAIT RQESAFMSDA RSGVGATGLM QLMPGTAKET SRKFGIPLAS
TQQLIVPDVN IRLGAAYLSQ VHGQFNGNRV LASAAYNAGP GRVRQWLKDT RHLAFDVWIE
TIPFDETRQY VQNVLSYAVI YGQKLNAPQP IVDWHERYFD DF
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