Gene PA14_24780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_24780 
Symbol 
ID4381064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2165841 
End bp2167223 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content64% 
IMG OID639324554 
Productputative transporter 
Protein accessionYP_790133 
Protein GI116051040 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA AGGAAAGTCC GAGAGCTTTC CATGCTGCCT CAGGCACCTT GCGAAACATC 
TGCCGAAGAA AAGCAGCGGT TCGCACGACG ACTACTGCTT CGTCATGGTG CGTTGAAGGG
TGGGCGTGGG CGTTTCTGGT GCTTTCTCTC TACGCGCGAA GGCTGCCTCA ATCCATGGAT
AACCTGAATA GTGCGGTGCA AGTCCTGATC CACGGCTCCA ATACCCTGTT CATCCTGCTC
GGAGCGGTGA TGGTGCTGGC GATGCACGCC GGCTTCGCCT TCCTCGAGGT GGGCACCGTG
CGCCTGAAGA ACCAGGTCAA CGCCCTGTCG AAGATCCTGT CCGACTTCGC CATCTCGGCG
CTGGCCTATT TCTTCGTCGG CTACTGGATC GCCTACGGCG TGACCTTCTT CCACCCGGCA
GCGGCGCTGA CCGTGGACAG TGGCTATGCG CTGGTGAAGT TCTTCTTCCT GCTGACCTTC
GCCGCGGCAA TCCCGGCGAT CATCTCCGGC GGCATCGCCG AGCGTGCCCG GTTCGGCCCG
CAGTTGTGCG CCACGGCGCT GATCGTGGCC TTCGTGTACC CGTTCTTCGA AGGCTTGGTG
TGGAACGGCA ATTTCGGCTT GCAGGAATGG CTGAAGTTGG AGTTCGGCGC ACCTTTCCAC
GATTTCGCCG GCTCCGTGGT GGTGCATGCG CTGGGCGGCT GGCTGGCATT GGCGGCGGTG
CTATTGCTGG GCAGCCGCAA CGGCCGCTAT CGCGACGGCA AGCTGGTGGC GATGGCGCCG
TCGAGCATCC CGTTCCTGGC ACTGGGGTCG TGGATCCTGA TCATCGGCTG GTTCGGCTTC
AACGTGATGA GCGCCCAGAC CCTCGCTGGG GTCAGCGGGC TGGTGGCGGT CAACTCCTTG
CTGGCGATGG TTGGCGGCAC CATGGCGTCG CTGCTGATCG GCCGCAACGA CCCGGGTTTC
CTGCACAACG GTCCGCTGGC CGGGTTGGTG GCGGTGTGCG CCGGTTCCGA CCTGATGCAT
CCGATCGGCG CGCTGGCTAC CGGCCTGGTG GCGGGGGCCC TGTTCGTCTG GGCGTTCACC
GCGACCCAGG TGCGCTGGAA GATCGACGAC GTCCTCGGTG TCTGGCCGTT GCACGGTCTT
TGCGGGGTCT GGGGCGGGAT TGCCTGCGGC ATCTTTGGCC AGCAGGCATT GGGTGGGCTC
GGCGGGGTGA GCCTGGCCAG CCAGGCGCTC GGCAGCCTGC TGGGGGTGAC GGTGGCTTTC
GCCGGCGGCC TGTTGGTCTA TGGGCTGATG AAGGCGCTGC TGGGCATCCG CTTGAGCCAG
GAGGAGGAGT ACTACGGCGC GGACCTGTCG ATCCACAAGA TCGGCGCGAT CAGCCACGAA
TGA
 
Protein sequence
MKIKESPRAF HAASGTLRNI CRRKAAVRTT TTASSWCVEG WAWAFLVLSL YARRLPQSMD 
NLNSAVQVLI HGSNTLFILL GAVMVLAMHA GFAFLEVGTV RLKNQVNALS KILSDFAISA
LAYFFVGYWI AYGVTFFHPA AALTVDSGYA LVKFFFLLTF AAAIPAIISG GIAERARFGP
QLCATALIVA FVYPFFEGLV WNGNFGLQEW LKLEFGAPFH DFAGSVVVHA LGGWLALAAV
LLLGSRNGRY RDGKLVAMAP SSIPFLALGS WILIIGWFGF NVMSAQTLAG VSGLVAVNSL
LAMVGGTMAS LLIGRNDPGF LHNGPLAGLV AVCAGSDLMH PIGALATGLV AGALFVWAFT
ATQVRWKIDD VLGVWPLHGL CGVWGGIACG IFGQQALGGL GGVSLASQAL GSLLGVTVAF
AGGLLVYGLM KALLGIRLSQ EEEYYGADLS IHKIGAISHE