Gene PA14_24720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_24720 
Symbol 
ID4381069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2160811 
End bp2163036 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content68% 
IMG OID639324549 
Productputative two-component sensor 
Protein accessionYP_790128 
Protein GI116051045 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCC AGAAACGCAG TGCGTGCATG CTCGGCCTGT TTCTCGTATT CGCCTGCATG 
GCGGGATATG CCGTTCCGGC GAGGGCGACG GCTGGCGAAT ATTCTTCCCT GCTCCGGATT
CCCGCTCCGG ATTGCCCGGA GGGCGCCGAT GCGGTCGTCG AAGCGCCGCT ACACCAGGCT
GCCGACGGGC TGCGCTCGCC GTCCCCTTCC AGCCTGGTGC TCGGCCTGCT GGTGGCCTGC
CTGGTCTGCG TCGGATGCCT GGGCTGGAAT ACTGTCCTTC AACTCAGGCT CAGGCGCTGG
CAACGTACCG AAGCCGACCT GAGCGGCCGC CTGGCATTGA AGCAGGCGCT GGTCGACGGG
ATTCCCTACC CGGTGAGCAT CCGCACGCTC GACGGTCGCC TGCTGGCCTG CAACCGCAAT
TACCTGGAAA GCCTGCGGAT GACCCGTGAG CAGGCCCGCG GCACCCTGTT GACCGATTCC
GACTGGGTCG AGGGCAGCAA GGCACGGCTC ATGCACCAGC AGTGCCTGGC GGTGGCTCGG
GGAGGAACGG CGAGCTTCAC CGACATGGCG GTGCGCATCG GCGGGCAATT GCTGGAGATC
CACCATTGGG TCACGCCCTA CAGGGATCGC CAGGGCCGGG TGCTCGGCCT GATGAACGGC
TGGATCGACA TCACCGAACG GGAGCGCCTG GCCCGCCAGT TGCGCGAGGC GATGCGCCAG
GCGGGCGAGG CGAATCGGGC GAAGAGCGTC TTCCTGGCGA CCATGAGCCA CGAGATCCGT
ACGCCGATGA ATGCGGTCAT CGGCATCCTC GAACTGGTCC TGCAGCGCCT GGCGCCGGAG
CAGCGCGAAC GCGCCTCGCT GGAGGTCGCC TACGAGGCTG CGGGGTCGCT GCAACTGCTC
ATCGGCGACA TCCTCGACGT CGCCAAGATC GAGTCCGGCC ACCTGACCCT CACGCCCGAG
CGGGTTCGCC TGCGCCATGT CGTGGAGTCG GTGCGCCGCA TGTTCGAAGG CCTGGCCCGG
CAGAAAGGCC TGAGGCTCGT TGTGGAGCTG GACGATGCCC CGGGACGGGA CGTGCTGATC
GATCCCCTGC GCTTCAAGCA GGTGCTCTCC AACCTGGTGA GCAATGCGAT CAAGTTCACC
GAGCGGGGAC AGGTGACGAT CCGTCTCCAG GAAAGGAGCC TGGACGAGGG GAGGGCGATC
GTCCGGGTGG ACGTGGAGGA TTCCGGTATC GGTATCGCTC CGGCGGACCA GGCGCGCCTG
TTCCAGCCTT TCATCCAGGT GGCCAAGGGA CGCACGGTGC AGGGCGGGAC CGGCCTTGGG
CTGGCGATCT GTCGGAAGTT GGTGGACCTC ATGGGCGGCG ATGTCGAGAT GCACAGCGAG
CCGGGCAAAG GCACCCGGGT GTCGCTCGAC CTGCTCTTGC GCCAGTGCGG GCCGAAAATG
CCTGAATCCA GCCAGGACCC GCTGGCAGCA TCCATGGAGC CGTCTCGCCG CCTGCATATC
CTCATCGCCG ACGACTATCC GCCCAACCGG GTACTGCTGC GCCAGCAACT GGAGTTTCTC
GGCCACCGGG TGGCGGAAGC GGAGGATGGC CAGGTGGCGC TGGAACTCTG GGCCGACGAG
CGCTTCGAGG TGCTGATCAG CGACTGCAAT ATGCCGCGCC TGAACGGCTA TCAGCTGGCA
CGCAGGATAC GCATCCAGGA ACGGTGCGAG CGGCGCGCGC CGATCCTGAT CCTCGGCTAT
ACCGCCGACG CCGAGCCGGA CGAGGTACAG CGCTGCCGCG ACGCGGGCAT GGATGATTGC
CTGTTCAAGC CGCTCGGCCT GGAGACCCTG CGCAACTACC TCGCGACCTC TTTCGGCCGC
GACGCCGCGC AGCCCCGGGG GCTCTATGAC GCGGACGCTC TCAGCAGCCT CGGTGGCGGC
CGCCCGGAAC GGCTGCGCGA ACTGCTGGAG ACCCTGCTAG GCAGCAACCG TCAGGACCTC
CAGCGCCTTG CCATCCTCCT GCGCGAGGGC GACAGGACCC GGCTCGCCGA GCATGCCCAC
CGCATCAAGG GCGCCGCGCG GATGATCGGG GCGCGTACCC TGCTGGAGGC CTGCGAGGCC
CTGGAGGACG CCTGCCGGCG AGGTGGCGAC GGGGAGTGCC TGCAGGCGTC TGGCGAAAGA
CTCCGGCTGG CCCTGGAGGC GTTGCAGGAG GAACTCCAGG AGCAGTTGGC GGCCGCTGCG
GTATGA
 
Protein sequence
MKFQKRSACM LGLFLVFACM AGYAVPARAT AGEYSSLLRI PAPDCPEGAD AVVEAPLHQA 
ADGLRSPSPS SLVLGLLVAC LVCVGCLGWN TVLQLRLRRW QRTEADLSGR LALKQALVDG
IPYPVSIRTL DGRLLACNRN YLESLRMTRE QARGTLLTDS DWVEGSKARL MHQQCLAVAR
GGTASFTDMA VRIGGQLLEI HHWVTPYRDR QGRVLGLMNG WIDITERERL ARQLREAMRQ
AGEANRAKSV FLATMSHEIR TPMNAVIGIL ELVLQRLAPE QRERASLEVA YEAAGSLQLL
IGDILDVAKI ESGHLTLTPE RVRLRHVVES VRRMFEGLAR QKGLRLVVEL DDAPGRDVLI
DPLRFKQVLS NLVSNAIKFT ERGQVTIRLQ ERSLDEGRAI VRVDVEDSGI GIAPADQARL
FQPFIQVAKG RTVQGGTGLG LAICRKLVDL MGGDVEMHSE PGKGTRVSLD LLLRQCGPKM
PESSQDPLAA SMEPSRRLHI LIADDYPPNR VLLRQQLEFL GHRVAEAEDG QVALELWADE
RFEVLISDCN MPRLNGYQLA RRIRIQERCE RRAPILILGY TADAEPDEVQ RCRDAGMDDC
LFKPLGLETL RNYLATSFGR DAAQPRGLYD ADALSSLGGG RPERLRELLE TLLGSNRQDL
QRLAILLREG DRTRLAEHAH RIKGAARMIG ARTLLEACEA LEDACRRGGD GECLQASGER
LRLALEALQE ELQEQLAAAA V