| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_24445 |
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| Symbol | gdhB |
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| ID | 4384196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2130044 |
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| End bp | 2134906 |
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| Gene Length | 4863 bp |
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| Protein Length | 1620 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639324527 |
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| Product | NAD-dependent glutamate dehydrogenase |
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| Protein accession | YP_790106 |
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| Protein GI | 116054423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.596581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCT TCACCGCGGC CAGCAAAGCC GATTTCCAGC ATCAACTGCA GACGGCACTG
GCGCAGCACC TCGGCGACAA GGCGTTACCA CAAGTCACGC TGTTCGCCGA ACAGTTCTTC
AGCCTGATCT CCCTCGATGA ACTGACCCAG CGTCGGCTTT CCGACCTGGT CGGTTGCACC
CTTTCCGCCT GGCGCCTGCT GGAGCGCTTC GACCGCGACC AGCCCGAAGT CCGCGTATAC
AACCCCGACT ACGAGAAGCA CGGCTGGCAA TCCACCCACA CCGCGGTGGA AGTGCTGCAC
CCGGACCTGC CGTTCCTGGT CGACTCGGTG CGCATGGAAC TGAACCGTCG CGGCTACAGC
ATCCATACCC TGCAGACCAA CGTCCTCAGC GTGCGCCGCT CGGCCAAGGG CGAGCTGAAG
GAAATCCTGC CCAAGGGTAG CCAAGGCAAG GACGTCAGCC AGGAATCGCT GATGTACCTG
GAGATCGACC GTTGCGCCCA CGCCGGCGAA CTGCGGGCGC TGGAGAAGGC CATCCTGGAA
GTGCTCGGTG AAGTACGCGT GACCGTCGCC GACTTCGAAC CGATGAAGGC CAAGGCCCGC
GAACTGCTGA CCTGGCTTGG CAAGGCCAAG CTGAAGGTGC CGGCGGAGGA ACTGAAGGAA
GTGCGCAGCT ATCTCGAATG GCTGCTGGAC AACCACTTCA CCTTCCTCGG CTACGAGGAA
TTCAGCGTCG CCGACGAGGC CGACGGCGGG CGCATGGTCT ACGACGAGAA ATCCTTCCTC
GGCCTGACCC GTCTGCTGCG TGCCGGCCTG AGCAAGGATG ACCTGCACAT CGAGGACTAT
GCCGTCGCCT ACCTGCGCGA ACCGGTCCTG CTGTCCTTCG CCAAGGCTGC CCATCCGAGC
CGCGTGCACC GCCCGGCCTA CCCGGACTAC GTGTCGATCC GCGAGCTGGA CGGCAAGGGC
CGGGTGATCC GCGAGTGCCG CTTCATGGGC CTGTTCACCT CCTCGGTGTA CAACGAGAGC
GTCAACGACA TTCCCTTCAT CCGCGGCAAG GTCGCCGAAG TGATGCGGCG CTCCGGTTTC
GACACCAAGG CCCACCTCGG CAAGGAACTG GCCCAGGTGC TGGAAGTACT GCCGCGCGAC
GACCTGTTCC AGACCCCGGT GGACGAGCTG TTCAGCACCG CCCTGGCGAT CGTCCGCATC
CAGGAGCGCA ACAAGATCCG CGTGTTCCTG CGCAAGGACC CCTACGGTCG CTTCTGCTAC
TGCCTGGCCT ACGTGCCGCG CGACGTGTAT TCCACCGAGA CGCGCCTGAA GATCCAGCAG
GTCCTGATGG AGCGCCTGCA AGCCAGCGAC TGCGAGTTCT GGACTTTCTT CTCCGAGTCG
GTGCTGGCCC GCGTGCAGTT CATCCTCCGC GTCGACCCGA AGTCGCGCAT CGACATCGAC
CCGGCGCGCC TGGAGGAAGA AGTGATCCAG GCCTGCCGTT CCTGGCAGGA CGACTACAGC
AGCCTGGTGG TGGAAAACCT CGGCGAGGCC AAGGGCACCA ACGTCCTGGC CGACTTCCCG
AAAGGCTTCC CGGCCGGCTA TCGCGAGCGC TTCGCCCCGC ACTTCGCGGT GGTCGACCTG
CAGCACCTGC TCAGCCTGTC CGAGCAGCGC CCGCTGGTGA TGAGCTTCTA CCAGCCGCTG
GCGCAGGGCG AGCAGCAACT GCACTGCAAG CTGTACCACG CCGACACCCC GCTGGCCCTG
TCCGACGTCC TGCCGATCCT GGAGAACCTC GGCCTGCGCG TGCTCGGCGA ATTCCCCTAC
CGCCTGCGCC ACCAGAACGG CCGCGAATAC TGGATCCACG ACTTCGCCTT CACCTACGCC
GAAGGGCTGG ACGTGGACAT CCAGCAGCTC AACGAGATCC TCCAGGACGC CTTCGTCCAC
ATCGTCAGCG GCGACGCCGA GAACGACGCC TTCAACCGCC TGGTGCTGAC CGCCAACCTG
CCGTGGCGCG ACGTCGCCCT GCTGCGTGCC TACGCGCGTT ACCTGAAGCA GATCCGCCTG
GGCTTCGACC TCGGCTACAT CGCCAGTGCG CTGAATGCCC ACACCGACAT CGCCCGCGAG
CTGGTGCGGC TGTTCAAGAC CCGCTTCTAC CTGGCGCGCA AACTCACCGC GGAAGACCTG
GAAGACAAGC AACAGAAGCT GGAGCAGGCG ATCCTCGGTG CCCTCGACGA AGTCCAGGTG
CTCAACGAGG ACCGCATCCT GCGGCGCTAC CTCGACCTGA TCAAGGCAAC CCTGCGGACC
AACTTCTACC AGCCCGACGG CAACGGCCAG AACAAGAGCT ACTTCAGCTT CAAGTTCAAC
CCGAAGGCCA TCCCGGAGCT GCCCAGGCCG GTGCCCAAGT ACGAGATCTT CGTCTACTCG
CCGCGCGTCG AGGGCGTGCA CCTGCGCGGC GGCAAGGTGG CTCGCGGCGG CTTGCGCTGG
TCGGACCGCG AGGAAGACTT CCGCACCGAG GTGCTCGGCC TGGTCAAGGC CCAGCAGGTG
AAGAACGCGG TGATCGTGCC GGTCGGCGCC AAGGGCGGCT TCGTCCCGCG CCGCCTGCCG
CTTGGCGGTA GCCGCGACGA GATCCAGGCC GAGGCGATCG CCTGCTACCG GATCTTCATT
TCCGGCCTGC TCGACATCAC CGACAACCTC AAGGAAGGCG AAGTGGTGCC GCCGGCCAAC
GTGGTCCGCC ACGACGAGGA CGATCCCTAC CTGGTGGTCG CCGCGGACAA GGGCACGGCG
ACCTTCTCCG ACATCGCCAA CGGCATCGCC GCCGAGTACG GTTTCTGGCT CGGCGACGCC
TTCGCCTCGG GCGGCTCCGC CGGCTACGAC CACAAGGGCA TGGGGATTAC CGCCAAGGGC
GCCTGGGTCA GCGTGCAACG GCACTTCCGC GAACGCGGCA TCGACGTGCA GAAGGACAAC
ATCAGCGTCA TCGGCATCGG CGACATGGCC GGCGACGTGT TCGGCAACGG CCTGCTGATG
TCGGACAAGC TGCAACTGGT GGCCGCCTTC AACCACATGC ATATCTTCAT CGACCCGAAC
CCGGACGCCG CCAGCAGCTT CGTCGAGCGC CAGCGCCTGT TCAACCTGCC GCGTTCGAGC
TGGGCCGACT ACGACGCCAA GCTGATCTCC GCCGGCGGCG GGATCTTCCT GCGCAGCGCC
AAGAGCATCG CCATCACCCC GGAAATGCAG GCGCGCTTCG ACATCCAGGC CGACAGGCTG
GCGCCCACCG AGCTGATCCA CGCGCTGCTC AAGGCGCCGG TCGACCTGCT CTGGAACGGC
GGTATCGGCA CCTACGTGAA GTCGAGCAAG GAAACCCACG CCGATGTCGG CGACAAGGCC
AACGACGGTC TGCGCGTCGA CGGCCGCGAG CTGCGCGCGA AGGTGGTGGG CGAGGGCGGC
AACCTGGGCA TGACCCAACT GGCGCGGGTC GAGTTCGGCC TGCACGGCGG TGCCAACAAC
ACCGATTTCA TCGACAACGT CGGTGGCGTG GACTGCTCCG ACCATGAGGT CAACATCAAG
ATCCTGCTCA ACGAAGTGGT GCAGGCCGGC GACATGACCG AGAAGCAGCG CAACGCGCTG
CTGGTGAAGA TGACCGACGC GGTCGGCGCC CTGGTGCTGG GCAACAACTA CAAGCAGACC
CAGGCGCTGT CCCTGGCGCA ACGCCGCGCC CGCGAGCGGA TCGCCGAATA CAAGCGGCTG
ATGGGCGACC TCGAGGCGCG CGGCAAGCTC GATCGCGCCC TGGAGTTCCT GCCTTCCGAC
GAGGAACTGG CGGAACGCAT CAGTGCCGGC CAGGGGCTGA CCCGCGCCGA GCTGTCGGTG
CTGATCTCCT ACAGCAAGAT CGACCTCAAG GAATCGCTGC TGAAATCGCT GGTGCCGGAC
GACGACTACC TGACCCGCGA CATGGAGACC GCCTTCCCGG CATTGCTGGC GGAGAAGTTC
GGCGACGCCA TGCGCCGCCA TCGCCTGAAG CGCGAGATCG TCAGCACGCA GATCGCCAAC
GACCTGGTCA ACCACATGGG CATCACCTTC GTGCAGCGCC TGAAGGAGTC CACCGGCATG
AGCGCGGCCA ACGTCGCCGG GGCCTACGTG ATCGTTCGCG ACGTGTTCCA CCTGCCGCAC
TGGTTCCGCC AGATCGAGAA CCTCGACTAC CAGGTGCCCG CTGATATCCA GCTGACCCTG
ATGGACGAAC TGATGCGTCT CGGTCGCCGC GCCACCCGCT GGTTCCTCCG CAGCCGCCGC
AACGAGCTGG ACGCGGCGCG CGACGTGGCC CACTTCGGCC CGCGCATCGC CGCCCTCGGC
CTGAAGCTCA ACGAGCTGCT CGAAGGGCCG ACCCGCGAGC TGTGGCAGGC GCGCTACCAG
ACCTACGTCG ACGCCGGCGT ACCGGAACTG CTGGCACGCA TGGTGGCCGG CACCAGCCAC
CTGTATACGC TGCTGCCGAT CATCGAGGCG TCCGACGTGA CCGGCCAGGA CACCGCGGAA
GTGGCCAAGG CCTATTTCGC CGTGGGCAGC GCGCTGGACC TTACCTGGTA CCTGCAACAG
ATCACCAACC TGCCGGTGGA GAACAACTGG CAGGCGCTGG CCCGCGAGGC GTTCCGCGAC
GACCTCGACT GGCAGCAGCG GGCGATCACC GTCTCGGTGT TGCAGATGCA GGACGGACCG
AAGGAGGTCG AGGCTCGCGT CGGCCTGTGG CTGGAACAAC ACCTGCCGCT GGTCGAGCGC
TGGCGGGCGA TGCTGGTCGA ACTGCGTGCC GCGTCGGGTA CCGACTACGC CATGTACGCC
GTGGCCAACC GCGAGCTGAT GGACCTGGCG CAGAGCAGCC AGCACGGTGT CTGCATCCCC
TGA
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| Protein sequence | MAFFTAASKA DFQHQLQTAL AQHLGDKALP QVTLFAEQFF SLISLDELTQ RRLSDLVGCT
LSAWRLLERF DRDQPEVRVY NPDYEKHGWQ STHTAVEVLH PDLPFLVDSV RMELNRRGYS
IHTLQTNVLS VRRSAKGELK EILPKGSQGK DVSQESLMYL EIDRCAHAGE LRALEKAILE
VLGEVRVTVA DFEPMKAKAR ELLTWLGKAK LKVPAEELKE VRSYLEWLLD NHFTFLGYEE
FSVADEADGG RMVYDEKSFL GLTRLLRAGL SKDDLHIEDY AVAYLREPVL LSFAKAAHPS
RVHRPAYPDY VSIRELDGKG RVIRECRFMG LFTSSVYNES VNDIPFIRGK VAEVMRRSGF
DTKAHLGKEL AQVLEVLPRD DLFQTPVDEL FSTALAIVRI QERNKIRVFL RKDPYGRFCY
CLAYVPRDVY STETRLKIQQ VLMERLQASD CEFWTFFSES VLARVQFILR VDPKSRIDID
PARLEEEVIQ ACRSWQDDYS SLVVENLGEA KGTNVLADFP KGFPAGYRER FAPHFAVVDL
QHLLSLSEQR PLVMSFYQPL AQGEQQLHCK LYHADTPLAL SDVLPILENL GLRVLGEFPY
RLRHQNGREY WIHDFAFTYA EGLDVDIQQL NEILQDAFVH IVSGDAENDA FNRLVLTANL
PWRDVALLRA YARYLKQIRL GFDLGYIASA LNAHTDIARE LVRLFKTRFY LARKLTAEDL
EDKQQKLEQA ILGALDEVQV LNEDRILRRY LDLIKATLRT NFYQPDGNGQ NKSYFSFKFN
PKAIPELPRP VPKYEIFVYS PRVEGVHLRG GKVARGGLRW SDREEDFRTE VLGLVKAQQV
KNAVIVPVGA KGGFVPRRLP LGGSRDEIQA EAIACYRIFI SGLLDITDNL KEGEVVPPAN
VVRHDEDDPY LVVAADKGTA TFSDIANGIA AEYGFWLGDA FASGGSAGYD HKGMGITAKG
AWVSVQRHFR ERGIDVQKDN ISVIGIGDMA GDVFGNGLLM SDKLQLVAAF NHMHIFIDPN
PDAASSFVER QRLFNLPRSS WADYDAKLIS AGGGIFLRSA KSIAITPEMQ ARFDIQADRL
APTELIHALL KAPVDLLWNG GIGTYVKSSK ETHADVGDKA NDGLRVDGRE LRAKVVGEGG
NLGMTQLARV EFGLHGGANN TDFIDNVGGV DCSDHEVNIK ILLNEVVQAG DMTEKQRNAL
LVKMTDAVGA LVLGNNYKQT QALSLAQRRA RERIAEYKRL MGDLEARGKL DRALEFLPSD
EELAERISAG QGLTRAELSV LISYSKIDLK ESLLKSLVPD DDYLTRDMET AFPALLAEKF
GDAMRRHRLK REIVSTQIAN DLVNHMGITF VQRLKESTGM SAANVAGAYV IVRDVFHLPH
WFRQIENLDY QVPADIQLTL MDELMRLGRR ATRWFLRSRR NELDAARDVA HFGPRIAALG
LKLNELLEGP TRELWQARYQ TYVDAGVPEL LARMVAGTSH LYTLLPIIEA SDVTGQDTAE
VAKAYFAVGS ALDLTWYLQQ ITNLPVENNW QALAREAFRD DLDWQQRAIT VSVLQMQDGP
KEVEARVGLW LEQHLPLVER WRAMLVELRA ASGTDYAMYA VANRELMDLA QSSQHGVCIP
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